PROTEIN: HRGMv2_4658_25_6
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Protein File & Metadata
Source:
HRGMv2_4658_25_6.pdb
Genome ID:
Protein ID:
HRGMv2_4658_25_6
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Protein Sequence
MKKDNLKFLL LFICILLGLF FLYGAIFESN NLIKVWDHAT YWLTTLGQRA AFLTKSIGEN 60 LSDVYYSINH DDYNLLPSLL LQPFFVWSNG DFFHYGMAIV IVGLIPAYIL YVLLYRKIYK 120 EKKNDWKYLL VFLIPFLTTP LIYGSVLDGY LDIIGVIPIL IIFYYTYGYD FETFDFKRTV 180 ILALCFFFTI VLRRYYVYFT FSYFISIAIV YIIRKLFVNR KCKLWKQAKN VFIIGISFSS 240 VILLFFHEMI EHIIKGNYAT AYSAYLDGGL FIQLWDLITK LGIVVAILFV VATVYLWMRK 300 KESREFIAIL VLNMVITILL FNSIQTMDQH HYYTIIFNIV IIISMFMVEL AKSIRKNDNR 360 RLYQVGLVLV CLIQFMTYSV AILRMPQPGL PVFTKTYFTY HDAQREALKP VMEYTKEMIE 420 KEPELSIYTI ASSHVYNNET FANYNLPDVA LRSKFVATPN VDLRDGFSDQ IYKATYVYLV 480 TPVQHHLDLK DQQVVEVLWN AIEKDTPIRS NYQLEKEFEV LGGTLKIYKK IEDYSTEDKE 540 YLKDQFNKSY SDYKELFEDR IMAE 564
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F7B2-F1-model_v4 | 4 | 560 | 8 | 493 | 0.7041 |
0.7822 |
| AF-K0F1P6-F1-model_v4 | 5 | 560 | 18 | 509 | 0.7024 |
0.7818 |
| AF-Q8ZP99-F1-model_v4 | 1 | 533 | 10 | 510 | 0.6883 |
0.7566 |
| AF-Q8CZ87-F1-model_v4 | 2 | 531 | 32 | 518 | 0.6574 |
0.7443 |
| AF-Q32DT1-F1-model_v4 | 6 | 531 | 1 | 549 | 0.6566 |
0.7111 |
| AF-Q9HUZ2-F1-model_v4 | 10 | 531 | 8 | 475 | 0.6543 |
0.7391 |
| AF-P76473-F1-model_v4 | 6 | 531 | 1 | 549 | 0.6525 |
0.7075 |
| AF-Q9BV10-F1-model_v4 | 3 | 530 | 1 | 484 | 0.6497 |
0.7198 |
| AF-A0A0H3GZQ8-F1-model_v4 | 4 | 531 | 1 | 550 | 0.6475 |
0.6998 |
| AF-B1WBY3-F1-model_v4 | 2 | 530 | 1 | 484 | 0.6458 |
0.7157 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QGR60030.1 | GT0 | 1 | 549 | 4 | 491 | 0.7015 |
0.7708 |
| UCV14583.1 | GT83 | 1 | 561 | 7 | 490 | 0.6973 |
0.7727 |
| A0A919H1R8 | GT83 | 6 | 529 | 1 | 481 | 0.6913 |
0.7674 |
| AF-A0A1D7VF51-F1-model_v4 | GT83 | 8 | 529 | 1 | 473 | 0.6888 |
0.7732 |
| AF-A0A1W5XPE4-F1-model_v4 | GT83 | 8 | 529 | 1 | 473 | 0.688 |
0.772 |
| AF-A0A2L0N2L3-F1-model_v4 | GT83 | 1 | 531 | 5 | 511 | 0.6864 |
0.7472 |
| AF-A0A5P2D8P6-F1-model_v4 | GT83 | 1 | 531 | 7 | 484 | 0.6863 |
0.7665 |
| AF-A0A6H1NM18-F1-model_v4 | GT83 | 9 | 531 | 1 | 481 | 0.686 |
0.7592 |
| AF-A0A2Z3H8D9-F1-model_v4 | GT83 | 3 | 551 | 26 | 578 | 0.6858 |
0.7313 |
| AF-H6MRT8-F1-model_v4 | GT83 | 1 | 531 | 6 | 507 | 0.6848 |
0.7469 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| M4V8Z6 | GT83 | 1 | 545 | 2 | 483 | 0.7084 |
0.7826 |
| Q1IJH5 | GT83 | 2 | 531 | 10 | 483 | 0.6999 |
0.7847 |
| A0A1L9GN74 | GT83 | 3 | 549 | 2 | 498 | 0.6986 |
0.7626 |
| UCV14583.1 | GT83 | 1 | 561 | 7 | 490 | 0.6973 |
0.7727 |
| A0A7D3ZKU3 | GT83 | 12 | 529 | 1 | 460 | 0.6943 |
0.781 |
| BCY11543.1 | GT83 | 1 | 530 | 1 | 472 | 0.6922 |
0.7753 |
| A0A919H1R8 | GT83 | 6 | 529 | 1 | 481 | 0.6913 |
0.7674 |
| H5SCZ1 | GT83 | 1 | 556 | 10 | 571 | 0.6903 |
0.7243 |
| D5EJZ3 | GT83 | 1 | 560 | 15 | 512 | 0.6863 |
0.7588 |
| UAB91770.1 | GT89 | 2 | 533 | 3 | 519 | 0.6859 |
0.7528 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7oci-assembly1.cif.gz_F | 1 | 538 | 5 | 613 | 0.6491 |
0.7339 |
| 6ezn-assembly1.cif.gz_F | 1 | 538 | 5 | 624 | 0.6405 |
0.7302 |
| 5f15-assembly1.cif.gz_A | 4 | 530 | 1 | 534 | 0.6372 |
0.6861 |
| 8if8-assembly1.cif.gz_B | 1 | 532 | 67 | 618 | 0.6231 |
0.7055 |
| 6gxc-assembly1.cif.gz_A | 2 | 531 | 9 | 706 | 0.581 |
0.6943 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 4 | 561 | 1 | 473 | 0.7024 |
0.7819 |
| AF-Q7N3Q9-F1-model_v4 | 2 | 532 | 1 | 552 | 0.6657 |
0.7166 |
| AF-Q8D339-F1-model_v4 | 2 | 531 | 6 | 562 | 0.6606 |
0.7169 |
| AF-A9R091-F1-model_v4 | 1 | 531 | 1 | 552 | 0.6604 |
0.7102 |
| AF-A1JPM4-F1-model_v4 | 4 | 531 | 2 | 552 | 0.66 |
0.7134 |
| AF-B2K5L1-F1-model_v4 | 4 | 531 | 2 | 552 | 0.6597 |
0.7133 |
| AF-Q1CIH9-F1-model_v4 | 3 | 531 | 1 | 552 | 0.6593 |
0.7117 |
| AF-Q66A06-F1-model_v4 | 4 | 531 | 2 | 552 | 0.6592 |
0.7126 |
| AF-Q8ZDX9-F1-model_v4 | 3 | 532 | 1 | 553 | 0.6588 |
0.7107 |
| AF-B4ETL9-F1-model_v4 | 2 | 531 | 1 | 551 | 0.6584 |
0.7098 |