Cluster: HRGMv2_4656_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4656
- CGC Family ID: CGCFAM_00169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4656_9 | HRGMv2_4656_9_3 | 6705 | 7937 | - | GT2 |
| pfam | HRGMv2_4656_9 | HRGMv2_4656_9_4 | 8035 | 8442 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_4656_9 | HRGMv2_4656_9_5 | 8439 | 9395 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4656_9 | HRGMv2_4656_9_6 | 9388 | 11064 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4656_9 | HRGMv2_4656_9_7 | 11161 | 12960 | - | 3.A.1.135.6 |
| TC | HRGMv2_4656_9 | HRGMv2_4656_9_8 | 12957 | 15140 | - | 3.A.1.135.6 |
Gene ID: HRGMv2_4656_9_3
Type: CAZyme
Location: 6705 - 7937 (-)
Type: CAZyme
Location: 6705 - 7937 (-)
Gene ID: HRGMv2_4656_9_4
Type: pfam
Location: 8035 - 8442 (-)
Type: pfam
Location: 8035 - 8442 (-)
Gene ID: HRGMv2_4656_9_5
Type: CAZyme
Location: 8439 - 9395 (-)
Type: CAZyme
Location: 8439 - 9395 (-)
Gene ID: HRGMv2_4656_9_6
Type:
Location: 9388 - 11064 (-)
Type:
Location: 9388 - 11064 (-)
Gene ID: HRGMv2_4656_9_7
Type: TC
Location: 11161 - 12960 (-)
Type: TC
Location: 11161 - 12960 (-)
Gene ID: HRGMv2_4656_9_8
Type: TC
Location: 12957 - 15140 (-)
Type: TC
Location: 12957 - 15140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1572
Species
UMGS1572 sp900553045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.