dbCAN Logo

PROTEIN: HRGMv2_4656_9_6

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4656_9_6.pdb
Genome ID:
HRGMv2_4656
Protein ID:
HRGMv2_4656_9_6

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLKKLKKHLL   PIFLLILSAL   ALMFIFITSP   YHQNHDTVIH   LANIEETKNA   ITIENLYPNE 60
ISKHIANDFG   YGNRLFYPPL   GYLTAGYSAK   ILDTTLGVGT   LDTMKIVYTV   SLLLSGFTMY 120
FFSYKLLKSR   KLAFLSGLIY   MAIPYHLSDI   YVRDAIAETF   LFPFLPLILL   GVYNLLEGNK 180
KAFYPQFIIG   YVGGILSHFT   MMLYFTFFLA   IFLLIYHKKV   FKKDFLLPFI   LATILTILIT 240
GFFLESMLIH   KLFGNYVAFQ   EGAMAGKIWG   LGNYPWDFLL   NYPTNGVNHS   FPILVSVLLL 300
LVFLWRKKLS   FPKYTKGFIT   FGLLAYLMTT   YLFPWDILPS   SFRILQFPWR   LGTFLALIVS 360
LYAPTALQNK   SVKLVAFFAC   FILINSIAFT   RFGSDTIYNL   ENRNYNDGMG   WQMEYLPVKT 420
KENLDYFNSR   DHEIHTSNGT   AFITLDDVPN   LNFSISSVTD   TTIVELPRIY   YFGYVLKDES 480
GTTYKLEESP   YGFLQVELTD   GNYYLTYEGT   TLNKILKKVS   LGTIVTSLVV   YITYLSWDAI 540
YKKRKKPYNK   NEVGEISG 558
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CFT8-F1-model_v4 2 542 1 537 0.8168 0.8538
AF-A0A5P3FT45-F1-model_v4 2 542 2 540 0.8102 0.8414
AF-A0A133CH43-F1-model_v4 3 538 2 544 0.7991 0.8364
AF-A0A1S8IUA0-F1-model_v4 2 543 9 566 0.7475 0.7919
AF-K0EVD5-F1-model_v4 1 558 2 739 0.7128 0.8249
AF-A0A133CH37-F1-model_v4 106 545 1 455 0.705 0.8253
AF-K0EUF9-F1-model_v4 8 554 1 732 0.7021 0.8242
AF-K0EMA3-F1-model_v4 1 545 32 758 0.6993 0.8333
AF-K0EV20-F1-model_v4 15 552 1 712 0.6927 0.8179
AF-A0A132Z547-F1-model_v4 1 545 4 872 0.6649 0.8403
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160SZH0-F1-model_v4 GT2 2 546 2 599 0.7229 0.8699
AF-A0A6C2YNQ2-F1-model_v4 GT83 1 442 19 460 0.6055 0.7317
AF-A0A7T1DRS7-F1-model_v4 GT83 1 467 6 469 0.602 0.6973
AF-A0A090I688-F1-model_v4 GT83 7 430 11 440 0.5954 0.7263
AF-B9JC29-F1-model_v4 GT83 7 442 5 467 0.5927 0.7208
AF-B2BSP5-F1-model_v4 GT83 7 432 11 439 0.5873 0.7256
AF-K9QWJ5-F1-model_v4 GT83 4 431 3 480 0.5856 0.7365
AF-A0A2I8A1A8-F1-model_v4 GT83 4 429 3 477 0.5852 0.7377
AF-A0A140JAG7-F1-model_v4 GT83 7 429 11 436 0.5848 0.7274
AF-K9Q6V1-F1-model_v4 GT83 4 431 3 480 0.5841 0.7344
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160SZH0 GT2 2 546 2 599 0.7229 0.8699
A0A1S6H5E4 GT39 4 396 1 396 0.6233 0.7606
F2LXI8 GT83 3 448 6 409 0.6203 0.752
A0A6N0HZZ0 GT83 3 443 7 457 0.6158 0.7181
A0A8D5JSU7 GT83 3 468 2 491 0.6151 0.6998
A0A840CAN4 GT83 1 492 4 445 0.6111 0.7225
A0A1V0HVL7 GT83 1 505 3 490 0.6073 0.6632
A0A6C2YNQ2 GT83 1 442 19 460 0.6055 0.7317
L0GV37 GT83 1 435 3 465 0.6026 0.7343
A0A8J2V5Q9 GT83 6 494 13 518 0.6016 0.6726
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8age-assembly1.cif.gz_A 2 431 5 493 0.5472 0.7549
7oci-assembly1.cif.gz_F 2 432 5 487 0.5443 0.7463
8b6l-assembly1.cif.gz_I 2 431 3 556 0.5362 0.7568
8agc-assembly1.cif.gz_A 1 431 2 546 0.536 0.7617
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42377-F1-model_v4 1 545 11 614 0.8389 0.9093
AF-O31582-F1-model_v4 2 541 1 859 0.6597 0.8309
AF-P46977-F1-model_v4 2 431 12 576 0.5332 0.7635
AF-Q5RCE2-F1-model_v4 2 431 12 576 0.533 0.7612
AF-P39007-F1-model_v4 2 431 10 567 0.5304 0.7639
AF-Q5HTX9-F1-model_v4 2 495 8 529 0.5218 0.661
AF-Q0P9C8-F1-model_v4 2 495 8 528 0.5203 0.6606
AF-Q93ZY3-F1-model_v4 1 431 6 636 0.5144 0.7642
AF-Q6F2Z1-F1-model_v4 1 431 15 643 0.5131 0.7661
Download Full SwissProt Results