Cluster: HRGMv2_4650_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4650
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4650_46 | HRGMv2_4650_46_5 | 3798 | 4991 | + | 2.A.36.6.4 |
| pfam | HRGMv2_4650_46 | HRGMv2_4650_46_6 | 4988 | 5767 | + | Ion_trans_2 |
| CAZyme | HRGMv2_4650_46 | HRGMv2_4650_46_7 | 5764 | 6726 | - | GT2 |
Gene ID: HRGMv2_4650_46_5
Type: TC
Location: 3798 - 4991 (+)
Type: TC
Location: 3798 - 4991 (+)
Gene ID: HRGMv2_4650_46_6
Type: pfam
Location: 4988 - 5767 (+)
Type: pfam
Location: 4988 - 5767 (+)
Gene ID: HRGMv2_4650_46_7
Type: CAZyme
Location: 5764 - 6726 (-)
Type: CAZyme
Location: 5764 - 6726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.