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Cluster: HRGMv2_4639_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4639_97 HRGMv2_4639_97_2 984 2006 - 3.D.4.3.2
TC HRGMv2_4639_97 HRGMv2_4639_97_3 2003 3448 - 3.D.4.3.2
pfam HRGMv2_4639_97 HRGMv2_4639_97_4 3752 4981 + MFS_3 | MFS_1
TC HRGMv2_4639_97 HRGMv2_4639_97_5 5110 6756 + 1.B.52.2.1
pfam HRGMv2_4639_97 HRGMv2_4639_97_6 6842 7645 + adh_short | KR | adh_short_C2 | SDR
CAZyme HRGMv2_4639_97 HRGMv2_4639_97_7 7638 9467 + GH15
STP HRGMv2_4639_97 HRGMv2_4639_97_8 10128 10532 - Response_reg
TC HRGMv2_4639_97 HRGMv2_4639_97_9 10747 12744 + 2.A.15.1.3
pfam HRGMv2_4639_97 HRGMv2_4639_97_10 12875 13945 + AbrB
NULL(UNKNOWN) HRGMv2_4639_97 HRGMv2_4639_97_11 13967 14227 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4639_97 HRGMv2_4639_97_12 14433 15692 + 9.B.34.1.3
Gene ID: HRGMv2_4639_97_2
Type: TC
Location: 984 - 2006 (-)
Gene ID: HRGMv2_4639_97_3
Type: TC
Location: 2003 - 3448 (-)
Gene ID: HRGMv2_4639_97_4
Type: pfam
Location: 3752 - 4981 (+)
Gene ID: HRGMv2_4639_97_5
Type: TC
Location: 5110 - 6756 (+)
Gene ID: HRGMv2_4639_97_6
Type: pfam
Location: 6842 - 7645 (+)
Gene ID: HRGMv2_4639_97_7
Type: CAZyme
Location: 7638 - 9467 (+)
Gene ID: HRGMv2_4639_97_8
Type: STP
Location: 10128 - 10532 (-)
Gene ID: HRGMv2_4639_97_9
Type: TC
Location: 10747 - 12744 (+)
Gene ID: HRGMv2_4639_97_10
Type: pfam
Location: 12875 - 13945 (+)
Gene ID: HRGMv2_4639_97_11
Type:
Location: 13967 - 14227 (-)
Gene ID: HRGMv2_4639_97_12
Type: TC
Location: 14433 - 15692 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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