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Cluster: HRGMv2_4639_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4639_67 HRGMv2_4639_67_2 224 1816 - AA1
TC HRGMv2_4639_67 HRGMv2_4639_67_3 2299 4086 + 3.A.9.1.1
pfam HRGMv2_4639_67 HRGMv2_4639_67_4 4113 5222 + Bmp
pfam HRGMv2_4639_67 HRGMv2_4639_67_5 5230 6342 + BPD_transp_2
TC HRGMv2_4639_67 HRGMv2_4639_67_6 6335 7255 + 3.A.1.2.12
pfam HRGMv2_4639_67 HRGMv2_4639_67_7 7268 8275 + CN_hydrolase
pfam HRGMv2_4639_67 HRGMv2_4639_67_8 8279 8968 + Isochorismatase
TC HRGMv2_4639_67 HRGMv2_4639_67_9 8972 10504 + 3.A.1.2.12
Gene ID: HRGMv2_4639_67_2
Type: CAZyme
Location: 224 - 1816 (-)
Gene ID: HRGMv2_4639_67_3
Type: TC
Location: 2299 - 4086 (+)
Gene ID: HRGMv2_4639_67_4
Type: pfam
Location: 4113 - 5222 (+)
Gene ID: HRGMv2_4639_67_5
Type: pfam
Location: 5230 - 6342 (+)
Gene ID: HRGMv2_4639_67_6
Type: TC
Location: 6335 - 7255 (+)
Gene ID: HRGMv2_4639_67_7
Type: pfam
Location: 7268 - 8275 (+)
Gene ID: HRGMv2_4639_67_8
Type: pfam
Location: 8279 - 8968 (+)
Gene ID: HRGMv2_4639_67_9
Type: TC
Location: 8972 - 10504 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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