dbCAN Logo

Cluster: HRGMv2_4639_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4639_56 HRGMv2_4639_56_16 16088 16777 - 3.A.1.4.7
TC HRGMv2_4639_56 HRGMv2_4639_56_17 16780 17517 - 3.A.1.4.4
TC HRGMv2_4639_56 HRGMv2_4639_56_18 17514 18656 - 3.A.1.4.4
TC HRGMv2_4639_56 HRGMv2_4639_56_19 18658 19560 - 3.A.1.4.5
TC HRGMv2_4639_56 HRGMv2_4639_56_20 19653 20834 - 3.A.1.4.5
TC HRGMv2_4639_56 HRGMv2_4639_56_21 21511 22659 + 3.A.1.4.5
STP HRGMv2_4639_56 HRGMv2_4639_56_22 22656 23288 + ANTAR
pfam HRGMv2_4639_56 HRGMv2_4639_56_23 23492 25027 + Amidase
TC HRGMv2_4639_56 HRGMv2_4639_56_24 25097 25678 + 2.A.99.1.2
pfam HRGMv2_4639_56 HRGMv2_4639_56_25 26023 26580 + HTH_23 | HTH_28 | HTH_29 | HTH_32
NULL(UNKNOWN) HRGMv2_4639_56 HRGMv2_4639_56_26 26617 27429 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4639_56 HRGMv2_4639_56_27 28227 29897 + AA1
Gene ID: HRGMv2_4639_56_16
Type: TC
Location: 16088 - 16777 (-)
Gene ID: HRGMv2_4639_56_17
Type: TC
Location: 16780 - 17517 (-)
Gene ID: HRGMv2_4639_56_18
Type: TC
Location: 17514 - 18656 (-)
Gene ID: HRGMv2_4639_56_19
Type: TC
Location: 18658 - 19560 (-)
Gene ID: HRGMv2_4639_56_20
Type: TC
Location: 19653 - 20834 (-)
Gene ID: HRGMv2_4639_56_21
Type: TC
Location: 21511 - 22659 (+)
Gene ID: HRGMv2_4639_56_22
Type: STP
Location: 22656 - 23288 (+)
Gene ID: HRGMv2_4639_56_23
Type: pfam
Location: 23492 - 25027 (+)
Gene ID: HRGMv2_4639_56_24
Type: TC
Location: 25097 - 25678 (+)
Gene ID: HRGMv2_4639_56_25
Type: pfam
Location: 26023 - 26580 (+)
Gene ID: HRGMv2_4639_56_26
Type:
Location: 26617 - 27429 (+)
Gene ID: HRGMv2_4639_56_27
Type: CAZyme
Location: 28227 - 29897 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List