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Cluster: HRGMv2_4639_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4639_44 HRGMv2_4639_44_9 10157 11092 + 3.A.1.2.16
TC HRGMv2_4639_44 HRGMv2_4639_44_10 11279 12229 + 1.B.3.1.1
TC HRGMv2_4639_44 HRGMv2_4639_44_11 12656 13600 + 3.A.1.2.1
TC HRGMv2_4639_44 HRGMv2_4639_44_12 13648 15201 + 3.A.1.2.3
TC HRGMv2_4639_44 HRGMv2_4639_44_13 15263 16288 + 3.A.1.2.15
CAZyme HRGMv2_4639_44 HRGMv2_4639_44_14 16509 17243 + GH179
pfam HRGMv2_4639_44 HRGMv2_4639_44_15 17667 18935 + DUF445
pfam HRGMv2_4639_44 HRGMv2_4639_44_16 19211 20287 + UvdE
TC HRGMv2_4639_44 HRGMv2_4639_44_17 20574 21491 + 8.A.5.1.4
TC HRGMv2_4639_44 HRGMv2_4639_44_18 21492 22784 + 2.A.12.1.18
Gene ID: HRGMv2_4639_44_9
Type: TC
Location: 10157 - 11092 (+)
Gene ID: HRGMv2_4639_44_10
Type: TC
Location: 11279 - 12229 (+)
Gene ID: HRGMv2_4639_44_11
Type: TC
Location: 12656 - 13600 (+)
Gene ID: HRGMv2_4639_44_12
Type: TC
Location: 13648 - 15201 (+)
Gene ID: HRGMv2_4639_44_13
Type: TC
Location: 15263 - 16288 (+)
Gene ID: HRGMv2_4639_44_14
Type: CAZyme
Location: 16509 - 17243 (+)
Gene ID: HRGMv2_4639_44_15
Type: pfam
Location: 17667 - 18935 (+)
Gene ID: HRGMv2_4639_44_16
Type: pfam
Location: 19211 - 20287 (+)
Gene ID: HRGMv2_4639_44_17
Type: TC
Location: 20574 - 21491 (+)
Gene ID: HRGMv2_4639_44_18
Type: TC
Location: 21492 - 22784 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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