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Cluster: HRGMv2_4639_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4639_43 HRGMv2_4639_43_3 3294 5933 + GH63
TC HRGMv2_4639_43 HRGMv2_4639_43_4 6055 7470 + 9.B.34.1.3
TC HRGMv2_4639_43 HRGMv2_4639_43_5 8181 9992 + 3.A.1.111.2
NULL(UNKNOWN) HRGMv2_4639_43 HRGMv2_4639_43_6 10058 10210 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4639_43 HRGMv2_4639_43_7 10210 10314 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4639_43 HRGMv2_4639_43_8 10542 12185 - GH37
TC HRGMv2_4639_43 HRGMv2_4639_43_9 12285 14198 - 2.A.21.9.1
Gene ID: HRGMv2_4639_43_3
Type: CAZyme
Location: 3294 - 5933 (+)
Gene ID: HRGMv2_4639_43_4
Type: TC
Location: 6055 - 7470 (+)
Gene ID: HRGMv2_4639_43_5
Type: TC
Location: 8181 - 9992 (+)
Gene ID: HRGMv2_4639_43_6
Type:
Location: 10058 - 10210 (+)
Gene ID: HRGMv2_4639_43_7
Type:
Location: 10210 - 10314 (+)
Gene ID: HRGMv2_4639_43_8
Type: CAZyme
Location: 10542 - 12185 (-)
Gene ID: HRGMv2_4639_43_9
Type: TC
Location: 12285 - 14198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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