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Cluster: HRGMv2_4639_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4639_37 HRGMv2_4639_37_2 732 1529 + 1.B.10.2.2
TC HRGMv2_4639_37 HRGMv2_4639_37_3 1599 2975 + 2.A.40.4.2
STP HRGMv2_4639_37 HRGMv2_4639_37_4 3046 3702 + TetR_N
pfam HRGMv2_4639_37 HRGMv2_4639_37_5 3699 4283 + UPF0029 | DUF1949
TC HRGMv2_4639_37 HRGMv2_4639_37_6 4443 5690 + 1.A.11.2.7
TC HRGMv2_4639_37 HRGMv2_4639_37_7 5902 7692 + 2.A.53.3.4
pfam HRGMv2_4639_37 HRGMv2_4639_37_8 7726 8097 + CopC
TC HRGMv2_4639_37 HRGMv2_4639_37_9 8100 8996 + 9.B.62.1.4
NULL(UNKNOWN) HRGMv2_4639_37 HRGMv2_4639_37_10 9031 9636 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4639_37 HRGMv2_4639_37_11 9805 10815 - FBPase | FBPase_C
CAZyme HRGMv2_4639_37 HRGMv2_4639_37_12 10980 13076 - GH13_11
CAZyme HRGMv2_4639_37 HRGMv2_4639_37_13 13343 15784 - GT35
pfam HRGMv2_4639_37 HRGMv2_4639_37_14 15956 16702 + adh_short | KR | adh_short_C2 | SDR
TC HRGMv2_4639_37 HRGMv2_4639_37_15 16849 18234 - 2.A.49.5.5
TC HRGMv2_4639_37 HRGMv2_4639_37_16 18278 20035 - 4.A.2.1.17
STP HRGMv2_4639_37 HRGMv2_4639_37_17 20032 21000 - PfkB
TC HRGMv2_4639_37 HRGMv2_4639_37_18 20997 23879 - 4.A.2.1.17
Gene ID: HRGMv2_4639_37_2
Type: TC
Location: 732 - 1529 (+)
Gene ID: HRGMv2_4639_37_3
Type: TC
Location: 1599 - 2975 (+)
Gene ID: HRGMv2_4639_37_4
Type: STP
Location: 3046 - 3702 (+)
Gene ID: HRGMv2_4639_37_5
Type: pfam
Location: 3699 - 4283 (+)
Gene ID: HRGMv2_4639_37_6
Type: TC
Location: 4443 - 5690 (+)
Gene ID: HRGMv2_4639_37_7
Type: TC
Location: 5902 - 7692 (+)
Gene ID: HRGMv2_4639_37_8
Type: pfam
Location: 7726 - 8097 (+)
Gene ID: HRGMv2_4639_37_9
Type: TC
Location: 8100 - 8996 (+)
Gene ID: HRGMv2_4639_37_10
Type:
Location: 9031 - 9636 (-)
Gene ID: HRGMv2_4639_37_11
Type: pfam
Location: 9805 - 10815 (-)
Gene ID: HRGMv2_4639_37_12
Type: CAZyme
Location: 10980 - 13076 (-)
Gene ID: HRGMv2_4639_37_13
Type: CAZyme
Location: 13343 - 15784 (-)
Gene ID: HRGMv2_4639_37_14
Type: pfam
Location: 15956 - 16702 (+)
Gene ID: HRGMv2_4639_37_15
Type: TC
Location: 16849 - 18234 (-)
Gene ID: HRGMv2_4639_37_16
Type: TC
Location: 18278 - 20035 (-)
Gene ID: HRGMv2_4639_37_17
Type: STP
Location: 20032 - 21000 (-)
Gene ID: HRGMv2_4639_37_18
Type: TC
Location: 20997 - 23879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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