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Cluster: HRGMv2_4639_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_36 43531 46323 - GH166
TC HRGMv2_4639_1 HRGMv2_4639_1_37 46616 47728 - 1.B.18.3.1
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_38 48012 49055 - GH5_5
TC HRGMv2_4639_1 HRGMv2_4639_1_39 49104 50369 - 2.A.66.2.4
NULL(UNKNOWN) HRGMv2_4639_1 HRGMv2_4639_1_40 50431 51708 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_41 51794 52534 - GT26
CAZyme HRGMv2_4639_1 HRGMv2_4639_1_42 52527 53402 - GT2
TC HRGMv2_4639_1 HRGMv2_4639_1_43 53604 55820 - 8.A.3.3.2
TC HRGMv2_4639_1 HRGMv2_4639_1_44 56430 57839 - 9.B.18.1.1
Gene ID: HRGMv2_4639_1_36
Type: CAZyme
Location: 43531 - 46323 (-)
Gene ID: HRGMv2_4639_1_37
Type: TC
Location: 46616 - 47728 (-)
Gene ID: HRGMv2_4639_1_38
Type: CAZyme
Location: 48012 - 49055 (-)
Gene ID: HRGMv2_4639_1_39
Type: TC
Location: 49104 - 50369 (-)
Gene ID: HRGMv2_4639_1_40
Type:
Location: 50431 - 51708 (-)
Gene ID: HRGMv2_4639_1_41
Type: CAZyme
Location: 51794 - 52534 (-)
Gene ID: HRGMv2_4639_1_42
Type: CAZyme
Location: 52527 - 53402 (-)
Gene ID: HRGMv2_4639_1_43
Type: TC
Location: 53604 - 55820 (-)
Gene ID: HRGMv2_4639_1_44
Type: TC
Location: 56430 - 57839 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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