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Cluster: HRGMv2_4630_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4630_26 HRGMv2_4630_26_38 40041 41660 - 1.B.52.2.1
TC HRGMv2_4630_26 HRGMv2_4630_26_39 41863 42300 + 9.B.27.3.3
TC HRGMv2_4630_26 HRGMv2_4630_26_40 42455 44077 + 1.B.52.2.1
NULL(UNKNOWN) HRGMv2_4630_26 HRGMv2_4630_26_41 44196 44585 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4630_26 HRGMv2_4630_26_42 44742 45026 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4630_26 HRGMv2_4630_26_43 45149 46765 - 2.A.1.6.8
CAZyme HRGMv2_4630_26 HRGMv2_4630_26_44 46892 48556 - AA3_2
TF HRGMv2_4630_26 HRGMv2_4630_26_45 48695 49597 + HTH_1
TC HRGMv2_4630_26 HRGMv2_4630_26_46 50003 52150 + 3.A.1.109.2
TC HRGMv2_4630_26 HRGMv2_4630_26_47 52147 53562 + 8.A.1.3.1
Gene ID: HRGMv2_4630_26_38
Type: TC
Location: 40041 - 41660 (-)
Gene ID: HRGMv2_4630_26_39
Type: TC
Location: 41863 - 42300 (+)
Gene ID: HRGMv2_4630_26_40
Type: TC
Location: 42455 - 44077 (+)
Gene ID: HRGMv2_4630_26_41
Type:
Location: 44196 - 44585 (+)
Gene ID: HRGMv2_4630_26_42
Type:
Location: 44742 - 45026 (-)
Gene ID: HRGMv2_4630_26_43
Type: TC
Location: 45149 - 46765 (-)
Gene ID: HRGMv2_4630_26_44
Type: CAZyme
Location: 46892 - 48556 (-)
Gene ID: HRGMv2_4630_26_45
Type: TF
Location: 48695 - 49597 (+)
Gene ID: HRGMv2_4630_26_46
Type: TC
Location: 50003 - 52150 (+)
Gene ID: HRGMv2_4630_26_47
Type: TC
Location: 52147 - 53562 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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