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Cluster: HRGMv2_4630_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_1 HRGMv2_4630_1_446 486369 487175 + GH23
pfam HRGMv2_4630_1 HRGMv2_4630_1_447 487300 488406 - Hist_deacetyl
peptidase HRGMv2_4630_1 HRGMv2_4630_1_448 488494 489645 - M24.UNW
TC HRGMv2_4630_1 HRGMv2_4630_1_449 489736 490578 - 3.A.1.11.6
TC HRGMv2_4630_1 HRGMv2_4630_1_450 490575 491426 - 3.A.1.11.7
TC HRGMv2_4630_1 HRGMv2_4630_1_451 491428 492549 - 3.A.1.11.6
TC HRGMv2_4630_1 HRGMv2_4630_1_452 492589 493668 - 3.A.1.11.6
Gene ID: HRGMv2_4630_1_446
Type: CAZyme
Location: 486369 - 487175 (+)
Gene ID: HRGMv2_4630_1_447
Type: pfam
Location: 487300 - 488406 (-)
Gene ID: HRGMv2_4630_1_448
Type: peptidase
Location: 488494 - 489645 (-)
Gene ID: HRGMv2_4630_1_449
Type: TC
Location: 489736 - 490578 (-)
Gene ID: HRGMv2_4630_1_450
Type: TC
Location: 490575 - 491426 (-)
Gene ID: HRGMv2_4630_1_451
Type: TC
Location: 491428 - 492549 (-)
Gene ID: HRGMv2_4630_1_452
Type: TC
Location: 492589 - 493668 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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