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Cluster: HRGMv2_4630_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4630_10 HRGMv2_4630_10_168 196015 196926 - 2.A.28.2.4
TF HRGMv2_4630_10 HRGMv2_4630_10_169 197117 198073 + HTH_AraC
NULL(UNKNOWN) HRGMv2_4630_10 HRGMv2_4630_10_170 198079 198318 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4630_10 HRGMv2_4630_10_171 198503 199654 - GH102
pfam HRGMv2_4630_10 HRGMv2_4630_10_172 199806 202166 + DNA_pol_B | DNA_pol_B_exo1 | DNApolII_N | DNApolII_insertion
pfam HRGMv2_4630_10 HRGMv2_4630_10_173 202227 202655 - PTPS
TC HRGMv2_4630_10 HRGMv2_4630_10_174 202968 208511 + 1.B.54.1.5
Gene ID: HRGMv2_4630_10_168
Type: TC
Location: 196015 - 196926 (-)
Gene ID: HRGMv2_4630_10_169
Type: TF
Location: 197117 - 198073 (+)
Gene ID: HRGMv2_4630_10_170
Type:
Location: 198079 - 198318 (-)
Gene ID: HRGMv2_4630_10_171
Type: CAZyme
Location: 198503 - 199654 (-)
Gene ID: HRGMv2_4630_10_172
Type: pfam
Location: 199806 - 202166 (+)
Gene ID: HRGMv2_4630_10_173
Type: pfam
Location: 202227 - 202655 (-)
Gene ID: HRGMv2_4630_10_174
Type: TC
Location: 202968 - 208511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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