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Cluster: HRGMv2_4630_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_1 HRGMv2_4630_1_420 459836 461140 - GT1
TC HRGMv2_4630_1 HRGMv2_4630_1_421 461172 462251 - 3.A.1.11.2
TC HRGMv2_4630_1 HRGMv2_4630_1_422 462244 463047 - 3.A.1.11.1
TC HRGMv2_4630_1 HRGMv2_4630_1_423 463040 463912 - 3.A.1.11.1
TC HRGMv2_4630_1 HRGMv2_4630_1_424 464001 465050 - 3.A.1.11.8
TF HRGMv2_4630_1 HRGMv2_4630_1_425 465250 466182 + GntR
CAZyme HRGMv2_4630_1 HRGMv2_4630_1_426 466269 467555 + GT1
NULL(UNKNOWN) HRGMv2_4630_1 HRGMv2_4630_1_427 467649 467789 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4630_1 HRGMv2_4630_1_428 467801 469327 - 2.A.1.3.32
STP HRGMv2_4630_1 HRGMv2_4630_1_429 469382 470047 - TetR_N
TF HRGMv2_4630_1 HRGMv2_4630_1_430 470222 470569 + HTH_5
TC HRGMv2_4630_1 HRGMv2_4630_1_431 470591 471874 + 3.A.4.1.1
Gene ID: HRGMv2_4630_1_420
Type: CAZyme
Location: 459836 - 461140 (-)
Gene ID: HRGMv2_4630_1_421
Type: TC
Location: 461172 - 462251 (-)
Gene ID: HRGMv2_4630_1_422
Type: TC
Location: 462244 - 463047 (-)
Gene ID: HRGMv2_4630_1_423
Type: TC
Location: 463040 - 463912 (-)
Gene ID: HRGMv2_4630_1_424
Type: TC
Location: 464001 - 465050 (-)
Gene ID: HRGMv2_4630_1_425
Type: TF
Location: 465250 - 466182 (+)
Gene ID: HRGMv2_4630_1_426
Type: CAZyme
Location: 466269 - 467555 (+)
Gene ID: HRGMv2_4630_1_427
Type:
Location: 467649 - 467789 (+)
Gene ID: HRGMv2_4630_1_428
Type: TC
Location: 467801 - 469327 (-)
Gene ID: HRGMv2_4630_1_429
Type: STP
Location: 469382 - 470047 (-)
Gene ID: HRGMv2_4630_1_430
Type: TF
Location: 470222 - 470569 (+)
Gene ID: HRGMv2_4630_1_431
Type: TC
Location: 470591 - 471874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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