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Cluster: HRGMv2_4630_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_5 HRGMv2_4630_5_202 226810 228291 + GT2
pfam HRGMv2_4630_5 HRGMv2_4630_5_203 228341 229513 + PilZ | HlyD_3
pfam HRGMv2_4630_5 HRGMv2_4630_5_204 229527 230936 + Sel1 | Sel1 | Sel1 | Sel1
TC HRGMv2_4630_5 HRGMv2_4630_5_205 230933 232471 + 1.B.13.1.1
pfam HRGMv2_4630_5 HRGMv2_4630_5_206 232483 234225 + NosD | NosD | Beta_helix
pfam HRGMv2_4630_5 HRGMv2_4630_5_207 234235 235647 + ALGX | CBM_26
CAZyme HRGMv2_4630_5 HRGMv2_4630_5_208 235665 236795 + PL5_1
TC HRGMv2_4630_5 HRGMv2_4630_5_209 237162 238724 + 2.A.50.2.1
Gene ID: HRGMv2_4630_5_202
Type: CAZyme
Location: 226810 - 228291 (+)
Gene ID: HRGMv2_4630_5_203
Type: pfam
Location: 228341 - 229513 (+)
Gene ID: HRGMv2_4630_5_204
Type: pfam
Location: 229527 - 230936 (+)
Gene ID: HRGMv2_4630_5_205
Type: TC
Location: 230933 - 232471 (+)
Gene ID: HRGMv2_4630_5_206
Type: pfam
Location: 232483 - 234225 (+)
Gene ID: HRGMv2_4630_5_207
Type: pfam
Location: 234235 - 235647 (+)
Gene ID: HRGMv2_4630_5_208
Type: CAZyme
Location: 235665 - 236795 (+)
Gene ID: HRGMv2_4630_5_209
Type: TC
Location: 237162 - 238724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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