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Cluster: HRGMv2_4630_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4630_3 HRGMv2_4630_3_182 189959 192238 + 8.A.7.1.1
TC HRGMv2_4630_3 HRGMv2_4630_3_183 192324 193349 + 9.B.34.1.3
pfam HRGMv2_4630_3 HRGMv2_4630_3_184 193346 194092 - TANGO2
TC HRGMv2_4630_3 HRGMv2_4630_3_185 194207 194989 + 2.A.102.4.1
pfam HRGMv2_4630_3 HRGMv2_4630_3_186 195010 195810 + LGT
pfam HRGMv2_4630_3 HRGMv2_4630_3_187 195942 196388 - NfeD
TC HRGMv2_4630_3 HRGMv2_4630_3_188 196388 197314 - 8.A.21.2.2
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_189 197617 198840 + GT4
TC HRGMv2_4630_3 HRGMv2_4630_3_190 198886 200670 - 3.A.15.4.1
Gene ID: HRGMv2_4630_3_182
Type: TC
Location: 189959 - 192238 (+)
Gene ID: HRGMv2_4630_3_183
Type: TC
Location: 192324 - 193349 (+)
Gene ID: HRGMv2_4630_3_184
Type: pfam
Location: 193346 - 194092 (-)
Gene ID: HRGMv2_4630_3_185
Type: TC
Location: 194207 - 194989 (+)
Gene ID: HRGMv2_4630_3_186
Type: pfam
Location: 195010 - 195810 (+)
Gene ID: HRGMv2_4630_3_187
Type: pfam
Location: 195942 - 196388 (-)
Gene ID: HRGMv2_4630_3_188
Type: TC
Location: 196388 - 197314 (-)
Gene ID: HRGMv2_4630_3_189
Type: CAZyme
Location: 197617 - 198840 (+)
Gene ID: HRGMv2_4630_3_190
Type: TC
Location: 198886 - 200670 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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