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Cluster: HRGMv2_4630_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_126 127582 128511 + GT2
TC HRGMv2_4630_3 HRGMv2_4630_3_127 128543 130756 + 8.A.3.3.1
pfam HRGMv2_4630_3 HRGMv2_4630_3_128 130784 131533 + WbqC
pfam HRGMv2_4630_3 HRGMv2_4630_3_129 131530 132051 + NusG
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_130 132096 133094 + GT2
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_131 133091 134323 + GT4
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_132 134292 136907 + GH39
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_133 136928 138046 + GT4
pfam HRGMv2_4630_3 HRGMv2_4630_3_134 138043 138918 + NTP_transferase | NTP_transf_3
TC HRGMv2_4630_3 HRGMv2_4630_3_135 139027 140427 + 9.B.18.1.1
TC HRGMv2_4630_3 HRGMv2_4630_3_136 140459 141577 + 1.B.18.3.1
TC HRGMv2_4630_3 HRGMv2_4630_3_137 142431 143801 + 1.B.25.1.2
pfam HRGMv2_4630_3 HRGMv2_4630_3_138 144029 145138 - PAD_porph
STP HRGMv2_4630_3 HRGMv2_4630_3_139 145357 145992 - TetR_N
TC HRGMv2_4630_3 HRGMv2_4630_3_140 146048 147109 - 3.A.1.11.2
Gene ID: HRGMv2_4630_3_126
Type: CAZyme
Location: 127582 - 128511 (+)
Gene ID: HRGMv2_4630_3_127
Type: TC
Location: 128543 - 130756 (+)
Gene ID: HRGMv2_4630_3_128
Type: pfam
Location: 130784 - 131533 (+)
Gene ID: HRGMv2_4630_3_129
Type: pfam
Location: 131530 - 132051 (+)
Gene ID: HRGMv2_4630_3_130
Type: CAZyme
Location: 132096 - 133094 (+)
Gene ID: HRGMv2_4630_3_131
Type: CAZyme
Location: 133091 - 134323 (+)
Gene ID: HRGMv2_4630_3_132
Type: CAZyme
Location: 134292 - 136907 (+)
Gene ID: HRGMv2_4630_3_133
Type: CAZyme
Location: 136928 - 138046 (+)
Gene ID: HRGMv2_4630_3_134
Type: pfam
Location: 138043 - 138918 (+)
Gene ID: HRGMv2_4630_3_135
Type: TC
Location: 139027 - 140427 (+)
Gene ID: HRGMv2_4630_3_136
Type: TC
Location: 140459 - 141577 (+)
Gene ID: HRGMv2_4630_3_137
Type: TC
Location: 142431 - 143801 (+)
Gene ID: HRGMv2_4630_3_138
Type: pfam
Location: 144029 - 145138 (-)
Gene ID: HRGMv2_4630_3_139
Type: STP
Location: 145357 - 145992 (-)
Gene ID: HRGMv2_4630_3_140
Type: TC
Location: 146048 - 147109 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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