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Cluster: HRGMv2_4629_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4629_12 HRGMv2_4629_12_41 47011 47442 + 3.A.15.2.1
NULL(UNKNOWN) HRGMv2_4629_12 HRGMv2_4629_12_42 47511 49430 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4629_12 HRGMv2_4629_12_43 49427 50290 + GT2
TC HRGMv2_4629_12 HRGMv2_4629_12_44 50296 52002 + 3.A.1.106.15
CAZyme HRGMv2_4629_12 HRGMv2_4629_12_45 52123 53022 + GT2
pfam HRGMv2_4629_12 HRGMv2_4629_12_46 53032 54126 + FAD_binding_2 | DAO | FAD_binding_3 | Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_4629_12 HRGMv2_4629_12_47 54127 55236 + GT4
CAZyme HRGMv2_4629_12 HRGMv2_4629_12_48 55217 56443 - GT4
Gene ID: HRGMv2_4629_12_41
Type: TC
Location: 47011 - 47442 (+)
Gene ID: HRGMv2_4629_12_42
Type:
Location: 47511 - 49430 (+)
Gene ID: HRGMv2_4629_12_43
Type: CAZyme
Location: 49427 - 50290 (+)
Gene ID: HRGMv2_4629_12_44
Type: TC
Location: 50296 - 52002 (+)
Gene ID: HRGMv2_4629_12_45
Type: CAZyme
Location: 52123 - 53022 (+)
Gene ID: HRGMv2_4629_12_46
Type: pfam
Location: 53032 - 54126 (+)
Gene ID: HRGMv2_4629_12_47
Type: CAZyme
Location: 54127 - 55236 (+)
Gene ID: HRGMv2_4629_12_48
Type: CAZyme
Location: 55217 - 56443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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