PROTEIN: HRGMv2_4629_12_42
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Protein File & Metadata
Source:
HRGMv2_4629_12_42.pdb
Genome ID:
Protein ID:
HRGMv2_4629_12_42
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Protein Sequence
MKNMTYFTKR AVTLLFLVLL ITACIYLPGL NGGFLFDDLP NLGDMSRYSD IHSWQNAKEF 60 IFNGFSGPTG RPISLATFWL TASSWIEGNA FPFKLINLFI HLLCGILLFY VIKNLLREYR 120 YESQKSAWIA LFAMSLWLVH PMFVSTTLYV VQRMTQLSLL FSLLGILGYL HGRALLITKP 180 IKAYAWMTCS IGLGTILATF SKENGALLPL LILVIEFCNP EKNNKPLWQW RLVCLWFPSI 240 LIAYIILKEI NFSANPWPSR NFNQLERLMS EARIVTEYLF RLYIPQIEGQ GLYQDGYQVS 300 RSLLNPISTL YSIIFLSLLF ISALVFRKKY SLYALAILFF FAAHLMESTL LGLELYFEHR 360 NYAAAIFIFL PLAAGLYWLS EQIKPKLVVM ISCFIIAIFS LMTLQRAELW SNTQQLKLYW 420 AQNNPDSPRA QIDYARYLLM NNKNDEANNI IKHTLERRPD SSLLTVRLIR QKMDTEQLQL 480 EDFDWMKSTI VHQLPEPQAV LDLRYLVEQI RADEQRLRLY SVPMIQVLQT MSHHPETRWN 540 DKNWQGLFLY LEGKLYLGNH NYKEGYNAFL KSLAIYNNAE TAMAMTMEFT QVDNYAMAYA 600 FLQEVKEKYI SQELKRDHRL TLMFNNLNSK LERDLGYQQ 639
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0K0EAW1-F1-model_v4 | 6 | 636 | 5 | 607 | 0.692 |
0.7528 |
| AF-Q9VF81-F1-model_v4 | 1 | 627 | 1 | 609 | 0.6821 |
0.7609 |
| AF-Q5T4D3-F1-model_v4 | 6 | 634 | 14 | 647 | 0.6719 |
0.7432 |
| AF-Q8BG19-F1-model_v4 | 6 | 634 | 13 | 647 | 0.6713 |
0.7426 |
| AF-Q20144-F1-model_v4 | 1 | 595 | 18 | 564 | 0.6678 |
0.8133 |
| AF-B0S6W0-F1-model_v4 | 4 | 634 | 5 | 645 | 0.6666 |
0.7342 |
| AF-Q7K4B6-F1-model_v4 | 1 | 638 | 23 | 716 | 0.6624 |
0.7912 |
| AF-Q9VQE9-F1-model_v4 | 1 | 639 | 9 | 728 | 0.6552 |
0.7602 |
| AF-G4VRY2-F1-model_v4 | 12 | 639 | 1 | 701 | 0.6524 |
0.7769 |
| AF-A0A0M3HEL6-F1-model_v4 | 12 | 636 | 1 | 719 | 0.6492 |
0.7707 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A291IM32 | GT105 | 3 | 638 | 6 | 673 | 0.8637 |
0.9024 |
| BCX82940.1 | GT105 | 5 | 636 | 6 | 642 | 0.8553 |
0.88 |
| A0A3E1LAV9 | GT105 | 26 | 604 | 1 | 581 | 0.8464 |
0.9008 |
| A0A8F1WLR6 | GT0 | 1 | 593 | 5 | 533 | 0.7566 |
0.8479 |
| A0A8F1WG50 | GT0 | 20 | 598 | 1 | 517 | 0.753 |
0.8451 |
| AF-A0A517TBY1-F1-model_v4 | GT0 | 1 | 597 | 1 | 576 | 0.7505 |
0.8134 |
| A0A975ET55 | GT105 | 1 | 637 | 12 | 639 | 0.7487 |
0.7793 |
| AF-A0A6M8V2R3-F1-model_v4 | GT105 | 6 | 638 | 14 | 598 | 0.7479 |
0.8062 |
| AF-A0A6I6JMY0-F1-model_v4 | GT0 | 5 | 639 | 2 | 561 | 0.747 |
0.8305 |
| CAG5094505.1 | GT105 | 5 | 637 | 2 | 582 | 0.7456 |
0.7982 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A291IM32 | GT105 | 3 | 638 | 6 | 673 | 0.8637 |
0.9024 |
| BCX82940.1 | GT105 | 5 | 636 | 6 | 642 | 0.8553 |
0.88 |
| A0A3E1LAV9 | GT105 | 26 | 604 | 1 | 581 | 0.8464 |
0.9008 |
| A0A975ET55 | GT105 | 1 | 637 | 12 | 639 | 0.7487 |
0.7793 |
| A0A6M8V2R3 | GT105 | 6 | 638 | 14 | 598 | 0.7479 |
0.8062 |
| CAG5094505.1 | GT105 | 5 | 637 | 2 | 582 | 0.7456 |
0.7982 |
| QWV96429.1 | GT105 | 1 | 638 | 2 | 571 | 0.7408 |
0.801 |
| G2LJD8 | GT105 | 2 | 598 | 3 | 595 | 0.7339 |
0.7974 |
| UTW66557.1 | GT105 | 6 | 634 | 1 | 584 | 0.7331 |
0.7884 |
| A0A2Z5SRU9 | GT105 | 1 | 574 | 3 | 542 | 0.7303 |
0.8071 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VF81-F1-model_v4 | 1 | 627 | 1 | 609 | 0.6821 |
0.7609 |
| AF-Q5T4D3-F1-model_v4 | 6 | 634 | 14 | 647 | 0.6719 |
0.7432 |
| AF-Q8BG19-F1-model_v4 | 6 | 634 | 13 | 647 | 0.6713 |
0.7426 |
| AF-Q20144-F1-model_v4 | 1 | 595 | 18 | 564 | 0.6678 |
0.8133 |
| AF-Q7K4B6-F1-model_v4 | 1 | 638 | 23 | 716 | 0.6624 |
0.7912 |
| AF-Q9VQE9-F1-model_v4 | 1 | 639 | 9 | 728 | 0.6552 |
0.7602 |
| AF-Q6DCD5-F1-model_v4 | 12 | 636 | 1 | 687 | 0.6487 |
0.7581 |
| AF-Q8N394-F1-model_v4 | 12 | 636 | 1 | 687 | 0.6468 |
0.7563 |
| AF-Q56A06-F1-model_v4 | 12 | 636 | 1 | 683 | 0.6463 |
0.7557 |
| AF-Q9V3X5-F1-model_v4 | 3 | 639 | 23 | 806 | 0.6458 |
0.7769 |