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Cluster: HRGMv2_4627_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4627_24 HRGMv2_4627_24_63 66788 67588 + 2.A.102.4.2
CAZyme HRGMv2_4627_24 HRGMv2_4627_24_64 67674 68600 - CE4
pfam HRGMv2_4627_24 HRGMv2_4627_24_65 68849 70504 + MFS_1
TC HRGMv2_4627_24 HRGMv2_4627_24_66 70501 71643 + 8.A.1.1.1
TC HRGMv2_4627_24 HRGMv2_4627_24_67 71730 72587 - 9.B.62.1.5
TC HRGMv2_4627_24 HRGMv2_4627_24_68 72591 72953 - 9.B.62.1.5
Gene ID: HRGMv2_4627_24_63
Type: TC
Location: 66788 - 67588 (+)
Gene ID: HRGMv2_4627_24_64
Type: CAZyme
Location: 67674 - 68600 (-)
Gene ID: HRGMv2_4627_24_65
Type: pfam
Location: 68849 - 70504 (+)
Gene ID: HRGMv2_4627_24_66
Type: TC
Location: 70501 - 71643 (+)
Gene ID: HRGMv2_4627_24_67
Type: TC
Location: 71730 - 72587 (-)
Gene ID: HRGMv2_4627_24_68
Type: TC
Location: 72591 - 72953 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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