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Cluster: HRGMv2_4627_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4627_1 HRGMv2_4627_1_391 453257 456760 - 2.A.21.9.2
STP HRGMv2_4627_1 HRGMv2_4627_1_392 457021 457383 + Response_reg
CAZyme HRGMv2_4627_1 HRGMv2_4627_1_393 457466 458758 + GT4
NULL(UNKNOWN) HRGMv2_4627_1 HRGMv2_4627_1_394 458905 459774 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4627_1 HRGMv2_4627_1_395 459843 460748 + HTH_AraC | HTH_AraC
TC HRGMv2_4627_1 HRGMv2_4627_1_396 460982 462292 + 3.A.1.1.49
TC HRGMv2_4627_1 HRGMv2_4627_1_397 462448 463374 + 3.A.1.1.49
TC HRGMv2_4627_1 HRGMv2_4627_1_398 463383 464213 + 3.A.1.1.49
TC HRGMv2_4627_1 HRGMv2_4627_1_399 464332 465435 + 3.A.1.1.49
Gene ID: HRGMv2_4627_1_391
Type: TC
Location: 453257 - 456760 (-)
Gene ID: HRGMv2_4627_1_392
Type: STP
Location: 457021 - 457383 (+)
Gene ID: HRGMv2_4627_1_393
Type: CAZyme
Location: 457466 - 458758 (+)
Gene ID: HRGMv2_4627_1_394
Type:
Location: 458905 - 459774 (+)
Gene ID: HRGMv2_4627_1_395
Type: TF
Location: 459843 - 460748 (+)
Gene ID: HRGMv2_4627_1_396
Type: TC
Location: 460982 - 462292 (+)
Gene ID: HRGMv2_4627_1_397
Type: TC
Location: 462448 - 463374 (+)
Gene ID: HRGMv2_4627_1_398
Type: TC
Location: 463383 - 464213 (+)
Gene ID: HRGMv2_4627_1_399
Type: TC
Location: 464332 - 465435 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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