Cluster: HRGMv2_4627_CGC37
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4627
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4627_19 | HRGMv2_4627_19_81 | 92197 | 93066 | - | 9.B.62.1.2 |
| pfam | HRGMv2_4627_19 | HRGMv2_4627_19_82 | 93070 | 93444 | - | CopC | Big_5 |
| TC | HRGMv2_4627_19 | HRGMv2_4627_19_83 | 93475 | 94341 | - | 1.B.76.1.6 |
| CAZyme | HRGMv2_4627_19 | HRGMv2_4627_19_84 | 94353 | 96059 | - | AA1 |
Gene ID: HRGMv2_4627_19_81
Type: TC
Location: 92197 - 93066 (-)
Type: TC
Location: 92197 - 93066 (-)
Gene ID: HRGMv2_4627_19_82
Type: pfam
Location: 93070 - 93444 (-)
Type: pfam
Location: 93070 - 93444 (-)
Gene ID: HRGMv2_4627_19_83
Type: TC
Location: 93475 - 94341 (-)
Type: TC
Location: 93475 - 94341 (-)
Gene ID: HRGMv2_4627_19_84
Type: CAZyme
Location: 94353 - 96059 (-)
Type: CAZyme
Location: 94353 - 96059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E parakoreensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.