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Cluster: HRGMv2_4627_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4627_13 HRGMv2_4627_13_43 46871 48574 - AA3_2
sulfatase HRGMv2_4627_13 HRGMv2_4627_13_44 48811 50283 - S1_6
STP HRGMv2_4627_13 HRGMv2_4627_13_45 50346 50966 - TetR_N
TC HRGMv2_4627_13 HRGMv2_4627_13_46 51395 53392 + 2.A.15.1.3
TC HRGMv2_4627_13 HRGMv2_4627_13_47 53571 54749 - 3.A.1.12.12
TC HRGMv2_4627_13 HRGMv2_4627_13_48 54746 55591 - 3.A.1.12.12
TC HRGMv2_4627_13 HRGMv2_4627_13_49 55658 56605 - 3.A.1.12.12
Gene ID: HRGMv2_4627_13_43
Type: CAZyme
Location: 46871 - 48574 (-)
Gene ID: HRGMv2_4627_13_44
Type: sulfatase
Location: 48811 - 50283 (-)
Gene ID: HRGMv2_4627_13_45
Type: STP
Location: 50346 - 50966 (-)
Gene ID: HRGMv2_4627_13_46
Type: TC
Location: 51395 - 53392 (+)
Gene ID: HRGMv2_4627_13_47
Type: TC
Location: 53571 - 54749 (-)
Gene ID: HRGMv2_4627_13_48
Type: TC
Location: 54746 - 55591 (-)
Gene ID: HRGMv2_4627_13_49
Type: TC
Location: 55658 - 56605 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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