Cluster: HRGMv2_4627_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4627
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4627_9 | HRGMv2_4627_9_76 | 91704 | 93419 | - | 4.A.1.1.15 |
| TC | HRGMv2_4627_9 | HRGMv2_4627_9_77 | 93455 | 95968 | - | 4.A.1.1.15 |
| STP | HRGMv2_4627_9 | HRGMv2_4627_9_78 | 96112 | 97134 | - | SIS | SIS |
| CAZyme | HRGMv2_4627_9 | HRGMv2_4627_9_79 | 97115 | 98221 | - | CE9 |
Gene ID: HRGMv2_4627_9_76
Type: TC
Location: 91704 - 93419 (-)
Type: TC
Location: 91704 - 93419 (-)
Gene ID: HRGMv2_4627_9_77
Type: TC
Location: 93455 - 95968 (-)
Type: TC
Location: 93455 - 95968 (-)
Gene ID: HRGMv2_4627_9_78
Type: STP
Location: 96112 - 97134 (-)
Type: STP
Location: 96112 - 97134 (-)
Gene ID: HRGMv2_4627_9_79
Type: CAZyme
Location: 97115 - 98221 (-)
Type: CAZyme
Location: 97115 - 98221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E parakoreensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.