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Cluster: HRGMv2_4627_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4627_8 HRGMv2_4627_8_2 1170 16166 - 2.A.1.42.2
TC HRGMv2_4627_8 HRGMv2_4627_8_3 16166 28513 - 4.C.1.1.6
peptidase HRGMv2_4627_8 HRGMv2_4627_8_4 28743 29477 - S33.UPW
sulfatase HRGMv2_4627_8 HRGMv2_4627_8_5 29611 30744 + S1_2
TC HRGMv2_4627_8 HRGMv2_4627_8_6 30924 32096 - 2.A.1.67.1
STP HRGMv2_4627_8 HRGMv2_4627_8_7 32431 33978 + NUDIX
sulfatase HRGMv2_4627_8 HRGMv2_4627_8_8 34066 34866 + S1_2
CAZyme HRGMv2_4627_8 HRGMv2_4627_8_9 34859 36685 + GH15
Gene ID: HRGMv2_4627_8_2
Type: TC
Location: 1170 - 16166 (-)
Gene ID: HRGMv2_4627_8_3
Type: TC
Location: 16166 - 28513 (-)
Gene ID: HRGMv2_4627_8_4
Type: peptidase
Location: 28743 - 29477 (-)
Gene ID: HRGMv2_4627_8_5
Type: sulfatase
Location: 29611 - 30744 (+)
Gene ID: HRGMv2_4627_8_6
Type: TC
Location: 30924 - 32096 (-)
Gene ID: HRGMv2_4627_8_7
Type: STP
Location: 32431 - 33978 (+)
Gene ID: HRGMv2_4627_8_8
Type: sulfatase
Location: 34066 - 34866 (+)
Gene ID: HRGMv2_4627_8_9
Type: CAZyme
Location: 34859 - 36685 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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