dbCAN Logo

Cluster: HRGMv2_4626_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4626_7 HRGMv2_4626_7_55 49412 50359 + 3.A.1.12.12
TC HRGMv2_4626_7 HRGMv2_4626_7_56 50431 51276 + 3.A.1.12.12
TC HRGMv2_4626_7 HRGMv2_4626_7_57 51273 52451 + 3.A.1.12.12
TC HRGMv2_4626_7 HRGMv2_4626_7_58 52566 54560 - 2.A.15.1.3
STP HRGMv2_4626_7 HRGMv2_4626_7_59 54976 55569 + TetR_N
sulfatase HRGMv2_4626_7 HRGMv2_4626_7_60 55678 57150 + S1_6
CAZyme HRGMv2_4626_7 HRGMv2_4626_7_61 57292 58995 + AA3_2
Gene ID: HRGMv2_4626_7_55
Type: TC
Location: 49412 - 50359 (+)
Gene ID: HRGMv2_4626_7_56
Type: TC
Location: 50431 - 51276 (+)
Gene ID: HRGMv2_4626_7_57
Type: TC
Location: 51273 - 52451 (+)
Gene ID: HRGMv2_4626_7_58
Type: TC
Location: 52566 - 54560 (-)
Gene ID: HRGMv2_4626_7_59
Type: STP
Location: 54976 - 55569 (+)
Gene ID: HRGMv2_4626_7_60
Type: sulfatase
Location: 55678 - 57150 (+)
Gene ID: HRGMv2_4626_7_61
Type: CAZyme
Location: 57292 - 58995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List