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Cluster: HRGMv2_4626_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4626_109 HRGMv2_4626_109_2 1751 3277 - GT83
CAZyme HRGMv2_4626_109 HRGMv2_4626_109_3 3274 4974 - GT83
TF HRGMv2_4626_109 HRGMv2_4626_109_4 5065 5724 - 0044258
TC HRGMv2_4626_109 HRGMv2_4626_109_5 5852 7255 + 2.A.1.3.48
pfam HRGMv2_4626_109 HRGMv2_4626_109_6 7534 8139 + AhpC-TSA | SCO1-SenC
pfam HRGMv2_4626_109 HRGMv2_4626_109_7 8169 8633 + PCuAC
TC HRGMv2_4626_109 HRGMv2_4626_109_8 8805 10148 - 1.B.25.1.1
pfam HRGMv2_4626_109 HRGMv2_4626_109_9 10145 10582 - Copper-bind
TC HRGMv2_4626_109 HRGMv2_4626_109_10 10605 11366 - 3.A.1.14.8
TC HRGMv2_4626_109 HRGMv2_4626_109_11 11363 12379 - 3.A.1.14.9
TC HRGMv2_4626_109 HRGMv2_4626_109_12 12376 13389 - 3.A.1.14.18
Gene ID: HRGMv2_4626_109_2
Type: CAZyme
Location: 1751 - 3277 (-)
Gene ID: HRGMv2_4626_109_3
Type: CAZyme
Location: 3274 - 4974 (-)
Gene ID: HRGMv2_4626_109_4
Type: TF
Location: 5065 - 5724 (-)
Gene ID: HRGMv2_4626_109_5
Type: TC
Location: 5852 - 7255 (+)
Gene ID: HRGMv2_4626_109_6
Type: pfam
Location: 7534 - 8139 (+)
Gene ID: HRGMv2_4626_109_7
Type: pfam
Location: 8169 - 8633 (+)
Gene ID: HRGMv2_4626_109_8
Type: TC
Location: 8805 - 10148 (-)
Gene ID: HRGMv2_4626_109_9
Type: pfam
Location: 10145 - 10582 (-)
Gene ID: HRGMv2_4626_109_10
Type: TC
Location: 10605 - 11366 (-)
Gene ID: HRGMv2_4626_109_11
Type: TC
Location: 11363 - 12379 (-)
Gene ID: HRGMv2_4626_109_12
Type: TC
Location: 12376 - 13389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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