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Cluster: HRGMv2_4626_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4626_78 HRGMv2_4626_78_5 4286 6517 + CBM48 | GH13_9
pfam HRGMv2_4626_78 HRGMv2_4626_78_6 6634 7437 - Exo_endo_phos
CAZyme HRGMv2_4626_78 HRGMv2_4626_78_7 7541 9685 - CBM48 | GH13_11
pfam HRGMv2_4626_78 HRGMv2_4626_78_8 9829 10056 - DUF2934
CAZyme HRGMv2_4626_78 HRGMv2_4626_78_9 10083 12164 - GH77
CAZyme HRGMv2_4626_78 HRGMv2_4626_78_10 12226 13797 - GT5
pfam HRGMv2_4626_78 HRGMv2_4626_78_11 14364 14810 - DUF411
pfam HRGMv2_4626_78 HRGMv2_4626_78_12 14913 15443 - DUF4946
TC HRGMv2_4626_78 HRGMv2_4626_78_13 15672 16949 + 2.A.42.2.1
Gene ID: HRGMv2_4626_78_5
Type: CAZyme
Location: 4286 - 6517 (+)
Gene ID: HRGMv2_4626_78_6
Type: pfam
Location: 6634 - 7437 (-)
Gene ID: HRGMv2_4626_78_7
Type: CAZyme
Location: 7541 - 9685 (-)
Gene ID: HRGMv2_4626_78_8
Type: pfam
Location: 9829 - 10056 (-)
Gene ID: HRGMv2_4626_78_9
Type: CAZyme
Location: 10083 - 12164 (-)
Gene ID: HRGMv2_4626_78_10
Type: CAZyme
Location: 12226 - 13797 (-)
Gene ID: HRGMv2_4626_78_11
Type: pfam
Location: 14364 - 14810 (-)
Gene ID: HRGMv2_4626_78_12
Type: pfam
Location: 14913 - 15443 (-)
Gene ID: HRGMv2_4626_78_13
Type: TC
Location: 15672 - 16949 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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