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Cluster: HRGMv2_4626_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4626_77 HRGMv2_4626_77_2 174 1577 - 2.A.21.9.2
TF HRGMv2_4626_77 HRGMv2_4626_77_3 1574 2284 - Trans_reg_C
TC HRGMv2_4626_77 HRGMv2_4626_77_4 2472 4850 + 1.B.14.1.9
pfam HRGMv2_4626_77 HRGMv2_4626_77_5 4875 5555 + 2OG-FeII_Oxy_3 | PKHD_C
STP HRGMv2_4626_77 HRGMv2_4626_77_6 5552 6700 + Peripla_BP_2
TC HRGMv2_4626_77 HRGMv2_4626_77_7 6697 7758 + 3.A.1.14.16
TC HRGMv2_4626_77 HRGMv2_4626_77_8 7755 8525 + 3.A.1.14.8
TC HRGMv2_4626_77 HRGMv2_4626_77_9 8673 9965 + 2.A.1.5.2
CAZyme HRGMv2_4626_77 HRGMv2_4626_77_10 9979 11454 + GH32
Gene ID: HRGMv2_4626_77_2
Type: TC
Location: 174 - 1577 (-)
Gene ID: HRGMv2_4626_77_3
Type: TF
Location: 1574 - 2284 (-)
Gene ID: HRGMv2_4626_77_4
Type: TC
Location: 2472 - 4850 (+)
Gene ID: HRGMv2_4626_77_5
Type: pfam
Location: 4875 - 5555 (+)
Gene ID: HRGMv2_4626_77_6
Type: STP
Location: 5552 - 6700 (+)
Gene ID: HRGMv2_4626_77_7
Type: TC
Location: 6697 - 7758 (+)
Gene ID: HRGMv2_4626_77_8
Type: TC
Location: 7755 - 8525 (+)
Gene ID: HRGMv2_4626_77_9
Type: TC
Location: 8673 - 9965 (+)
Gene ID: HRGMv2_4626_77_10
Type: CAZyme
Location: 9979 - 11454 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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