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Cluster: HRGMv2_4582_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4582_13 HRGMv2_4582_13_16 18656 19339 - 1.A.62.2.1
TC HRGMv2_4582_13 HRGMv2_4582_13_17 19678 20511 + 3.A.1.132.3
STP HRGMv2_4582_13 HRGMv2_4582_13_18 20567 21850 - AAA
NULL(UNKNOWN) HRGMv2_4582_13 HRGMv2_4582_13_19 21941 23587 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4582_13 HRGMv2_4582_13_20 24131 26053 + CBM48 | GH13_9
pfam HRGMv2_4582_13 HRGMv2_4582_13_21 26066 27250 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4582_13 HRGMv2_4582_13_22 27271 28395 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4582_13 HRGMv2_4582_13_23 28395 30548 + GT5
CAZyme HRGMv2_4582_13 HRGMv2_4582_13_24 30638 33094 + GT35
TC HRGMv2_4582_13 HRGMv2_4582_13_25 33119 34006 + 8.A.9.1.2
Gene ID: HRGMv2_4582_13_16
Type: TC
Location: 18656 - 19339 (-)
Gene ID: HRGMv2_4582_13_17
Type: TC
Location: 19678 - 20511 (+)
Gene ID: HRGMv2_4582_13_18
Type: STP
Location: 20567 - 21850 (-)
Gene ID: HRGMv2_4582_13_19
Type:
Location: 21941 - 23587 (-)
Gene ID: HRGMv2_4582_13_20
Type: CAZyme
Location: 24131 - 26053 (+)
Gene ID: HRGMv2_4582_13_21
Type: pfam
Location: 26066 - 27250 (+)
Gene ID: HRGMv2_4582_13_22
Type: pfam
Location: 27271 - 28395 (+)
Gene ID: HRGMv2_4582_13_23
Type: CAZyme
Location: 28395 - 30548 (+)
Gene ID: HRGMv2_4582_13_24
Type: CAZyme
Location: 30638 - 33094 (+)
Gene ID: HRGMv2_4582_13_25
Type: TC
Location: 33119 - 34006 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
RGIG577
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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