PROTEIN: HRGMv2_4582_13_19
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Protein File & Metadata
Source:
HRGMv2_4582_13_19.pdb
Genome ID:
Protein ID:
HRGMv2_4582_13_19
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Protein Sequence
MRRRKIPKEN WAVGFLLLFA LHAIRYIYYG FTYFPQLDDY IQYHNYAAFN DGFFDIMQKT 60 GLLASRPLAG VLDQLLWSPL FSVMIVAVLL MAAMYAASGC LFRSVLQKYF PVGPIFLVVY 120 GLLPLGFEGT YWVSASSRIV VGLFFAALSL WFFQRFLLGG KGWNLLPYFL FQFLCFGLYE 180 QVIVFSITAT FLLALWHFPK DHKRPFAALL TFVNAGLLVL LLGLFRQEGS AYSSRMVTAF 240 PWEEGYVSYL LLPVLKQMWQ VLAEANLMTL GKGFLRGLSI QWQNGTGLFV LTLLVLCGLW 300 VWHFSTKQTQ LPEKPHRGWG LLFGFLLALA PLTPFLIITN PWFCVRNAVT SFAGAALMVD 360 LLVGWLFCRV PKGQMVTSCL AGVLAFVCCI AGVSELHDYR ATYQQDQKVG SAIVDILDEV 420 ESTDSVGILN LESTYLSDVN YMFHEHITGC TSSGWALTGM AHSLVDEREF PYVCPLSTVT 480 YLYAPYNKAT QNLDTFTRLY YYDPENNTLL PVIKEKTGEG TYLLSFEDGS LCGLVYEEDD 540 YGYFSPAT 548
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CC27-F1-model_v4 | 5 | 530 | 21 | 510 | 0.6228 |
0.6956 |
| AF-Q8ZKK1-F1-model_v4 | 6 | 530 | 2 | 499 | 0.614 |
0.6711 |
| AF-Q8ZP99-F1-model_v4 | 5 | 529 | 13 | 492 | 0.6109 |
0.6893 |
| AF-O06152-F1-model_v4 | 5 | 531 | 50 | 540 | 0.6055 |
0.6916 |
| AF-Q8ZR61-F1-model_v4 | 4 | 548 | 1 | 535 | 0.604 |
0.6391 |
| AF-Q9HUZ2-F1-model_v4 | 4 | 529 | 1 | 478 | 0.6009 |
0.6619 |
| AF-Q2FXN8-F1-model_v4 | 10 | 505 | 5 | 495 | 0.5951 |
0.6479 |
| AF-I6Y460-F1-model_v4 | 7 | 546 | 5 | 589 | 0.592 |
0.6395 |
| AF-K0F1P6-F1-model_v4 | 7 | 514 | 17 | 494 | 0.5869 |
0.6647 |
| AF-Q7AQM1-F1-model_v4 | 24 | 547 | 1 | 568 | 0.5735 |
0.6259 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q036W1-F1-model_v4 | GT0 | 7 | 544 | 9 | 508 | 0.6783 |
0.7326 |
| AF-A0A1S6JA40-F1-model_v4 | GT83 | 3 | 530 | 2 | 481 | 0.6598 |
0.7223 |
| AF-A0A1B1BBS8-F1-model_v4 | GT83 | 5 | 529 | 8 | 482 | 0.6582 |
0.7255 |
| AF-A0A3S9MDS1-F1-model_v4 | GT83 | 3 | 529 | 7 | 484 | 0.6582 |
0.7234 |
| AF-A0A0H2UXC8-F1-model_v4 | GT0 | 7 | 536 | 7 | 479 | 0.6568 |
0.7313 |
| AF-Q7UDK9-F1-model_v4 | GT0 | 7 | 536 | 7 | 479 | 0.6566 |
0.7306 |
| AF-E4NCG6-F1-model_v4 | GT83 | 10 | 527 | 1 | 470 | 0.656 |
0.7225 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 9 | 527 | 1 | 472 | 0.6525 |
0.718 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 5 | 527 | 1 | 477 | 0.6516 |
0.7138 |
| AF-A0A1C5K3K0-F1-model_v4 | GT83 | 1 | 529 | 28 | 506 | 0.651 |
0.7287 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D3ZKU3 | GT83 | 17 | 527 | 1 | 460 | 0.6535 |
0.7258 |
| A0A1H2NJF7 | GT83 | 5 | 529 | 23 | 519 | 0.6523 |
0.7151 |
| A0A1C5K3K0 | GT83 | 1 | 529 | 28 | 506 | 0.651 |
0.7287 |
| I0H3R1 | GT83 | 7 | 528 | 6 | 483 | 0.6502 |
0.7155 |
| Q1IJH5 | GT83 | 3 | 528 | 8 | 483 | 0.6488 |
0.715 |
| A0A316B179 | GT83 | 1 | 532 | 10 | 473 | 0.6484 |
0.7333 |
| A0A3T1AZA5 | GT83 | 5 | 528 | 12 | 485 | 0.6483 |
0.7191 |
| A0A345SWL1 | GT83 | 10 | 530 | 1 | 501 | 0.6474 |
0.6929 |
| A0A120F7X7 | GT83 | 6 | 528 | 25 | 510 | 0.6464 |
0.7172 |
| A0A3N1I944 | GT83 | 7 | 528 | 23 | 499 | 0.6447 |
0.7188 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 9 | 514 | 1 | 466 | 0.6103 |
0.6818 |
| AF-Q1MJ97-F1-model_v4 | 7 | 513 | 4 | 488 | 0.607 |
0.6688 |
| AF-Q1MJ94-F1-model_v4 | 8 | 512 | 6 | 488 | 0.5989 |
0.6642 |
| AF-Q9H6U8-F1-model_v4 | 1 | 529 | 47 | 606 | 0.5497 |
0.6148 |
| AF-Q8VDI9-F1-model_v4 | 1 | 527 | 46 | 604 | 0.5482 |
0.6151 |