Cluster: HRGMv2_4578_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4578_69 | HRGMv2_4578_69_2 | 821 | 2980 | - | GH112 |
| pfam | HRGMv2_4578_69 | HRGMv2_4578_69_3 | 3010 | 3201 | - | DUF6903 |
| TC | HRGMv2_4578_69 | HRGMv2_4578_69_4 | 3213 | 4109 | - | 3.A.1.1.25 |
| TC | HRGMv2_4578_69 | HRGMv2_4578_69_5 | 4122 | 5006 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_4578_69_2
Type: CAZyme
Location: 821 - 2980 (-)
Type: CAZyme
Location: 821 - 2980 (-)
Gene ID: HRGMv2_4578_69_3
Type: pfam
Location: 3010 - 3201 (-)
Type: pfam
Location: 3010 - 3201 (-)
Gene ID: HRGMv2_4578_69_4
Type: TC
Location: 3213 - 4109 (-)
Type: TC
Location: 3213 - 4109 (-)
Gene ID: HRGMv2_4578_69_5
Type: TC
Location: 4122 - 5006 (-)
Type: TC
Location: 4122 - 5006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.