Cluster: HRGMv2_4578_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4578_45 | HRGMv2_4578_45_12 | 12526 | 13335 | + | 3.A.1.103.6 |
| TC | HRGMv2_4578_45 | HRGMv2_4578_45_13 | 13349 | 14092 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_4578_45 | HRGMv2_4578_45_14 | 14096 | 15982 | + | GT2 |
Gene ID: HRGMv2_4578_45_12
Type: TC
Location: 12526 - 13335 (+)
Type: TC
Location: 12526 - 13335 (+)
Gene ID: HRGMv2_4578_45_13
Type: TC
Location: 13349 - 14092 (+)
Type: TC
Location: 13349 - 14092 (+)
Gene ID: HRGMv2_4578_45_14
Type: CAZyme
Location: 14096 - 15982 (+)
Type: CAZyme
Location: 14096 - 15982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.