dbCAN Logo

Cluster: HRGMv2_4578_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4578_24 HRGMv2_4578_24_5 4372 6609 - GH3
CAZyme HRGMv2_4578_24 HRGMv2_4578_24_6 6846 9461 + CBM67 | GH78
pfam HRGMv2_4578_24 HRGMv2_4578_24_7 9570 10418 - AP_endonuc_2
CAZyme HRGMv2_4578_24 HRGMv2_4578_24_8 10422 12236 - CBM32 | GH43_28
CAZyme HRGMv2_4578_24 HRGMv2_4578_24_9 12243 14450 - GH2
pfam HRGMv2_4578_24 HRGMv2_4578_24_10 14532 16022 - MFS_2
CAZyme HRGMv2_4578_24 HRGMv2_4578_24_11 16267 17568 + GH1
STP HRGMv2_4578_24 HRGMv2_4578_24_12 17623 18159 - TetR_N
sulfatase HRGMv2_4578_24 HRGMv2_4578_24_13 18422 19429 + S1_2
TC HRGMv2_4578_24 HRGMv2_4578_24_14 19505 20851 + 2.A.66.1.13
Gene ID: HRGMv2_4578_24_5
Type: CAZyme
Location: 4372 - 6609 (-)
Gene ID: HRGMv2_4578_24_6
Type: CAZyme
Location: 6846 - 9461 (+)
Gene ID: HRGMv2_4578_24_7
Type: pfam
Location: 9570 - 10418 (-)
Gene ID: HRGMv2_4578_24_8
Type: CAZyme
Location: 10422 - 12236 (-)
Gene ID: HRGMv2_4578_24_9
Type: CAZyme
Location: 12243 - 14450 (-)
Gene ID: HRGMv2_4578_24_10
Type: pfam
Location: 14532 - 16022 (-)
Gene ID: HRGMv2_4578_24_11
Type: CAZyme
Location: 16267 - 17568 (+)
Gene ID: HRGMv2_4578_24_12
Type: STP
Location: 17623 - 18159 (-)
Gene ID: HRGMv2_4578_24_13
Type: sulfatase
Location: 18422 - 19429 (+)
Gene ID: HRGMv2_4578_24_14
Type: TC
Location: 19505 - 20851 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List