Cluster: HRGMv2_4568_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4568
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_63 | HRGMv2_4568_63_7 | 4073 | 5917 | + | 3.A.3.6.10 |
| TF | HRGMv2_4568_63 | HRGMv2_4568_63_8 | 6030 | 6815 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4568_63 | HRGMv2_4568_63_9 | 6958 | 8289 | + | GH43_35 |
| CAZyme | HRGMv2_4568_63 | HRGMv2_4568_63_10 | 8307 | 10106 | + | GH5_4 |
| CAZyme | HRGMv2_4568_63 | HRGMv2_4568_63_11 | 10191 | 12257 | - | GH31_4 |
Gene ID: HRGMv2_4568_63_7
Type: TC
Location: 4073 - 5917 (+)
Type: TC
Location: 4073 - 5917 (+)
Gene ID: HRGMv2_4568_63_8
Type: TF
Location: 6030 - 6815 (+)
Type: TF
Location: 6030 - 6815 (+)
Gene ID: HRGMv2_4568_63_9
Type: CAZyme
Location: 6958 - 8289 (+)
Type: CAZyme
Location: 6958 - 8289 (+)
Gene ID: HRGMv2_4568_63_10
Type: CAZyme
Location: 8307 - 10106 (+)
Type: CAZyme
Location: 8307 - 10106 (+)
Gene ID: HRGMv2_4568_63_11
Type: CAZyme
Location: 10191 - 12257 (-)
Type: CAZyme
Location: 10191 - 12257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.