Cluster: HRGMv2_4568_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4568
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_1 | HRGMv2_4568_1_29 | 35683 | 38259 | + | 3.A.3.5.15 |
| TC | HRGMv2_4568_1 | HRGMv2_4568_1_30 | 38332 | 39966 | - | 4.C.1.1.4 |
| CAZyme | HRGMv2_4568_1 | HRGMv2_4568_1_31 | 40134 | 42116 | - | CBM2 | GH5_1 |
| CAZyme | HRGMv2_4568_1 | HRGMv2_4568_1_32 | 42263 | 44776 | - | GH5_4 |
Gene ID: HRGMv2_4568_1_29
Type: TC
Location: 35683 - 38259 (+)
Type: TC
Location: 35683 - 38259 (+)
Gene ID: HRGMv2_4568_1_30
Type: TC
Location: 38332 - 39966 (-)
Type: TC
Location: 38332 - 39966 (-)
Gene ID: HRGMv2_4568_1_31
Type: CAZyme
Location: 40134 - 42116 (-)
Type: CAZyme
Location: 40134 - 42116 (-)
Gene ID: HRGMv2_4568_1_32
Type: CAZyme
Location: 42263 - 44776 (-)
Type: CAZyme
Location: 42263 - 44776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.