Cluster: HRGMv2_4568_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4568
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_50 | HRGMv2_4568_50_1 | 144 | 1547 | + | 9.B.145.1.2 |
| TC | HRGMv2_4568_50 | HRGMv2_4568_50_2 | 2084 | 2677 | + | 2.A.115.2.14 |
| pfam | HRGMv2_4568_50 | HRGMv2_4568_50_3 | 2692 | 3192 | + | tRNA_edit |
| CAZyme | HRGMv2_4568_50 | HRGMv2_4568_50_4 | 3402 | 4247 | + | GT2 |
| CAZyme | HRGMv2_4568_50 | HRGMv2_4568_50_5 | 4469 | 6133 | + | CBM35 | GH26 |
Gene ID: HRGMv2_4568_50_1
Type: TC
Location: 144 - 1547 (+)
Type: TC
Location: 144 - 1547 (+)
Gene ID: HRGMv2_4568_50_2
Type: TC
Location: 2084 - 2677 (+)
Type: TC
Location: 2084 - 2677 (+)
Gene ID: HRGMv2_4568_50_3
Type: pfam
Location: 2692 - 3192 (+)
Type: pfam
Location: 2692 - 3192 (+)
Gene ID: HRGMv2_4568_50_4
Type: CAZyme
Location: 3402 - 4247 (+)
Type: CAZyme
Location: 3402 - 4247 (+)
Gene ID: HRGMv2_4568_50_5
Type: CAZyme
Location: 4469 - 6133 (+)
Type: CAZyme
Location: 4469 - 6133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.