Cluster: HRGMv2_4568_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4568
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_14 | HRGMv2_4568_14_7 | 6418 | 6996 | - | 4.F.1.1.8 |
| pfam | HRGMv2_4568_14 | HRGMv2_4568_14_8 | 7015 | 8346 | - | UPF0004 | Radical_SAM | TRAM_2 |
| CAZyme | HRGMv2_4568_14 | HRGMv2_4568_14_9 | 9104 | 10357 | - | CE17 |
| TC | HRGMv2_4568_14 | HRGMv2_4568_14_10 | 10467 | 11609 | - | 3.A.1.1.22 |
| pfam | HRGMv2_4568_14 | HRGMv2_4568_14_11 | 11798 | 12535 | - | PseudoU_synth_2 | S4 |
| TC | HRGMv2_4568_14 | HRGMv2_4568_14_12 | 12537 | 13898 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_4568_14_7
Type: TC
Location: 6418 - 6996 (-)
Type: TC
Location: 6418 - 6996 (-)
Gene ID: HRGMv2_4568_14_8
Type: pfam
Location: 7015 - 8346 (-)
Type: pfam
Location: 7015 - 8346 (-)
Gene ID: HRGMv2_4568_14_9
Type: CAZyme
Location: 9104 - 10357 (-)
Type: CAZyme
Location: 9104 - 10357 (-)
Gene ID: HRGMv2_4568_14_10
Type: TC
Location: 10467 - 11609 (-)
Type: TC
Location: 10467 - 11609 (-)
Gene ID: HRGMv2_4568_14_11
Type: pfam
Location: 11798 - 12535 (-)
Type: pfam
Location: 11798 - 12535 (-)
Gene ID: HRGMv2_4568_14_12
Type: TC
Location: 12537 - 13898 (-)
Type: TC
Location: 12537 - 13898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.