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Cluster: HRGMv2_4565_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4565_11 HRGMv2_4565_11_5 3042 3719 + 9.B.143.2.3
TF HRGMv2_4565_11 HRGMv2_4565_11_6 3839 4963 + 0043095
pfam HRGMv2_4565_11 HRGMv2_4565_11_7 5114 6160 + ADH_zinc_N | ADH_N | Glu_dehyd_C
CAZyme HRGMv2_4565_11 HRGMv2_4565_11_8 6322 9342 + GH38
pfam HRGMv2_4565_11 HRGMv2_4565_11_9 9410 9754 - MIF
pfam HRGMv2_4565_11 HRGMv2_4565_11_10 9774 10127 - Glutaredoxin | ArsC
TC HRGMv2_4565_11 HRGMv2_4565_11_11 10372 12399 - 9.A.8.1.6
TC HRGMv2_4565_11 HRGMv2_4565_11_12 12539 12772 - 9.A.8.1.6
Gene ID: HRGMv2_4565_11_5
Type: TC
Location: 3042 - 3719 (+)
Gene ID: HRGMv2_4565_11_6
Type: TF
Location: 3839 - 4963 (+)
Gene ID: HRGMv2_4565_11_7
Type: pfam
Location: 5114 - 6160 (+)
Gene ID: HRGMv2_4565_11_8
Type: CAZyme
Location: 6322 - 9342 (+)
Gene ID: HRGMv2_4565_11_9
Type: pfam
Location: 9410 - 9754 (-)
Gene ID: HRGMv2_4565_11_10
Type: pfam
Location: 9774 - 10127 (-)
Gene ID: HRGMv2_4565_11_11
Type: TC
Location: 10372 - 12399 (-)
Gene ID: HRGMv2_4565_11_12
Type: TC
Location: 12539 - 12772 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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