Cluster: HRGMv2_4565_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_10 | HRGMv2_4565_10_15 | 15067 | 17298 | - | GH36 |
| TC | HRGMv2_4565_10 | HRGMv2_4565_10_16 | 17405 | 17956 | - | 2.A.88.1.8 |
| pfam | HRGMv2_4565_10 | HRGMv2_4565_10_17 | 18144 | 20147 | + | FBPase_2 |
| STP | HRGMv2_4565_10 | HRGMv2_4565_10_18 | 20357 | 21379 | + | PfkB |
| CAZyme | HRGMv2_4565_10 | HRGMv2_4565_10_19 | 21568 | 24582 | + | GH2 |
Gene ID: HRGMv2_4565_10_15
Type: CAZyme
Location: 15067 - 17298 (-)
Type: CAZyme
Location: 15067 - 17298 (-)
Gene ID: HRGMv2_4565_10_16
Type: TC
Location: 17405 - 17956 (-)
Type: TC
Location: 17405 - 17956 (-)
Gene ID: HRGMv2_4565_10_17
Type: pfam
Location: 18144 - 20147 (+)
Type: pfam
Location: 18144 - 20147 (+)
Gene ID: HRGMv2_4565_10_18
Type: STP
Location: 20357 - 21379 (+)
Type: STP
Location: 20357 - 21379 (+)
Gene ID: HRGMv2_4565_10_19
Type: CAZyme
Location: 21568 - 24582 (+)
Type: CAZyme
Location: 21568 - 24582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.