Cluster: HRGMv2_4565_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4565_86 | HRGMv2_4565_86_1 | 2 | 1267 | + | 9.B.33.1.1 |
| TF | HRGMv2_4565_86 | HRGMv2_4565_86_2 | 1280 | 2818 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4565_86 | HRGMv2_4565_86_3 | 2858 | 4864 | + | GH31_4 |
| TC | HRGMv2_4565_86 | HRGMv2_4565_86_4 | 4939 | 5823 | + | 2.A.115.1.1 |
Gene ID: HRGMv2_4565_86_1
Type: TC
Location: 2 - 1267 (+)
Type: TC
Location: 2 - 1267 (+)
Gene ID: HRGMv2_4565_86_2
Type: TF
Location: 1280 - 2818 (+)
Type: TF
Location: 1280 - 2818 (+)
Gene ID: HRGMv2_4565_86_3
Type: CAZyme
Location: 2858 - 4864 (+)
Type: CAZyme
Location: 2858 - 4864 (+)
Gene ID: HRGMv2_4565_86_4
Type: TC
Location: 4939 - 5823 (+)
Type: TC
Location: 4939 - 5823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.