Cluster: HRGMv2_4565_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4565_52 | HRGMv2_4565_52_2 | 498 | 1502 | + | 3.A.3.7.1 |
| pfam | HRGMv2_4565_52 | HRGMv2_4565_52_3 | 1791 | 2804 | + | Aldo_ket_red |
| pfam | HRGMv2_4565_52 | HRGMv2_4565_52_4 | 2827 | 3255 | + | RbsD_FucU |
| CAZyme | HRGMv2_4565_52 | HRGMv2_4565_52_5 | 3431 | 4603 | + | GH179 |
Gene ID: HRGMv2_4565_52_2
Type: TC
Location: 498 - 1502 (+)
Type: TC
Location: 498 - 1502 (+)
Gene ID: HRGMv2_4565_52_3
Type: pfam
Location: 1791 - 2804 (+)
Type: pfam
Location: 1791 - 2804 (+)
Gene ID: HRGMv2_4565_52_4
Type: pfam
Location: 2827 - 3255 (+)
Type: pfam
Location: 2827 - 3255 (+)
Gene ID: HRGMv2_4565_52_5
Type: CAZyme
Location: 3431 - 4603 (+)
Type: CAZyme
Location: 3431 - 4603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.