Cluster: HRGMv2_4565_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_50 | HRGMv2_4565_50_12 | 10450 | 11772 | + | GH4 |
| pfam | HRGMv2_4565_50 | HRGMv2_4565_50_13 | 11987 | 13288 | + | Lactamase_B |
| TC | HRGMv2_4565_50 | HRGMv2_4565_50_14 | 13381 | 14820 | - | 2.A.38.1.3 |
Gene ID: HRGMv2_4565_50_12
Type: CAZyme
Location: 10450 - 11772 (+)
Type: CAZyme
Location: 10450 - 11772 (+)
Gene ID: HRGMv2_4565_50_13
Type: pfam
Location: 11987 - 13288 (+)
Type: pfam
Location: 11987 - 13288 (+)
Gene ID: HRGMv2_4565_50_14
Type: TC
Location: 13381 - 14820 (-)
Type: TC
Location: 13381 - 14820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.