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Cluster: HRGMv2_4565_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4565_47 HRGMv2_4565_47_3 1381 3432 + GH42
NULL(UNKNOWN) HRGMv2_4565_47 HRGMv2_4565_47_4 3493 3831 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4565_47 HRGMv2_4565_47_5 4373 6166 + 8.A.59.2.1
TF HRGMv2_4565_47 HRGMv2_4565_47_6 6265 7077 + HTH_AraC
STP HRGMv2_4565_47 HRGMv2_4565_47_7 7263 8612 + SBP_bac_1
TC HRGMv2_4565_47 HRGMv2_4565_47_8 8701 9609 + 3.A.1.1.21
TC HRGMv2_4565_47 HRGMv2_4565_47_9 9606 10445 + 3.A.1.1.34
pfam HRGMv2_4565_47 HRGMv2_4565_47_10 10468 11457 + ADH_zinc_N | ADH_N
TC HRGMv2_4565_47 HRGMv2_4565_47_11 11613 13391 + 2.A.103.1.3
Gene ID: HRGMv2_4565_47_3
Type: CAZyme
Location: 1381 - 3432 (+)
Gene ID: HRGMv2_4565_47_4
Type:
Location: 3493 - 3831 (+)
Gene ID: HRGMv2_4565_47_5
Type: TC
Location: 4373 - 6166 (+)
Gene ID: HRGMv2_4565_47_6
Type: TF
Location: 6265 - 7077 (+)
Gene ID: HRGMv2_4565_47_7
Type: STP
Location: 7263 - 8612 (+)
Gene ID: HRGMv2_4565_47_8
Type: TC
Location: 8701 - 9609 (+)
Gene ID: HRGMv2_4565_47_9
Type: TC
Location: 9606 - 10445 (+)
Gene ID: HRGMv2_4565_47_10
Type: pfam
Location: 10468 - 11457 (+)
Gene ID: HRGMv2_4565_47_11
Type: TC
Location: 11613 - 13391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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