Cluster: HRGMv2_4565_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4565_46 | HRGMv2_4565_46_5 | 3621 | 5225 | - | 2.A.22.4.2 |
| TF | HRGMv2_4565_46 | HRGMv2_4565_46_6 | 5340 | 6320 | - | HTH_11 |
| CAZyme | HRGMv2_4565_46 | HRGMv2_4565_46_7 | 6360 | 7421 | - | GT2 |
| pfam | HRGMv2_4565_46 | HRGMv2_4565_46_8 | 7494 | 8603 | - | Amino_oxidase | GLF | NAD_binding_8 |
| TC | HRGMv2_4565_46 | HRGMv2_4565_46_9 | 8985 | 9839 | - | 3.A.1.1.44 |
| TC | HRGMv2_4565_46 | HRGMv2_4565_46_10 | 9859 | 10770 | - | 3.A.1.1.7 |
| TC | HRGMv2_4565_46 | HRGMv2_4565_46_11 | 10909 | 12270 | - | 3.A.1.1.41 |
Gene ID: HRGMv2_4565_46_5
Type: TC
Location: 3621 - 5225 (-)
Type: TC
Location: 3621 - 5225 (-)
Gene ID: HRGMv2_4565_46_6
Type: TF
Location: 5340 - 6320 (-)
Type: TF
Location: 5340 - 6320 (-)
Gene ID: HRGMv2_4565_46_7
Type: CAZyme
Location: 6360 - 7421 (-)
Type: CAZyme
Location: 6360 - 7421 (-)
Gene ID: HRGMv2_4565_46_8
Type: pfam
Location: 7494 - 8603 (-)
Type: pfam
Location: 7494 - 8603 (-)
Gene ID: HRGMv2_4565_46_9
Type: TC
Location: 8985 - 9839 (-)
Type: TC
Location: 8985 - 9839 (-)
Gene ID: HRGMv2_4565_46_10
Type: TC
Location: 9859 - 10770 (-)
Type: TC
Location: 9859 - 10770 (-)
Gene ID: HRGMv2_4565_46_11
Type: TC
Location: 10909 - 12270 (-)
Type: TC
Location: 10909 - 12270 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.