Cluster: HRGMv2_4565_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4565
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_24 | HRGMv2_4565_24_23 | 18464 | 19744 | - | GH140 |
| pfam | HRGMv2_4565_24 | HRGMv2_4565_24_24 | 19996 | 20973 | + | Epimerase |
| CAZyme | HRGMv2_4565_24 | HRGMv2_4565_24_25 | 21075 | 22607 | - | GH140 |
| TC | HRGMv2_4565_24 | HRGMv2_4565_24_26 | 22688 | 23536 | - | 3.A.1.1.18 |
| TC | HRGMv2_4565_24 | HRGMv2_4565_24_27 | 23555 | 24430 | - | 3.A.1.1.36 |
Gene ID: HRGMv2_4565_24_23
Type: CAZyme
Location: 18464 - 19744 (-)
Type: CAZyme
Location: 18464 - 19744 (-)
Gene ID: HRGMv2_4565_24_24
Type: pfam
Location: 19996 - 20973 (+)
Type: pfam
Location: 19996 - 20973 (+)
Gene ID: HRGMv2_4565_24_25
Type: CAZyme
Location: 21075 - 22607 (-)
Type: CAZyme
Location: 21075 - 22607 (-)
Gene ID: HRGMv2_4565_24_26
Type: TC
Location: 22688 - 23536 (-)
Type: TC
Location: 22688 - 23536 (-)
Gene ID: HRGMv2_4565_24_27
Type: TC
Location: 23555 - 24430 (-)
Type: TC
Location: 23555 - 24430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.