dbCAN Logo

Cluster: HRGMv2_4564_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4564_1 HRGMv2_4564_1_454 463340 463876 - 2.A.87.3.2
pfam HRGMv2_4564_1 HRGMv2_4564_1_455 464166 464759 + DUF4358
TC HRGMv2_4564_1 HRGMv2_4564_1_456 464910 466307 + 2.A.50.2.1
pfam HRGMv2_4564_1 HRGMv2_4564_1_457 466327 467529 + DHHW | ALGX
CAZyme HRGMv2_4564_1 HRGMv2_4564_1_458 467545 468675 + GT28
TC HRGMv2_4564_1 HRGMv2_4564_1_459 468672 469301 + 9.B.31.1.1
NULL(UNKNOWN) HRGMv2_4564_1 HRGMv2_4564_1_460 469311 470264 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4564_1 HRGMv2_4564_1_461 470231 471238 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4564_1 HRGMv2_4564_1_462 471248 472675 - 9.A.11.1.2
pfam HRGMv2_4564_1 HRGMv2_4564_1_463 472785 473264 - ATP-cone | Zn_ribbon_NrdR
TC HRGMv2_4564_1 HRGMv2_4564_1_464 473300 475630 - 2.A.6.4.2
Gene ID: HRGMv2_4564_1_454
Type: TC
Location: 463340 - 463876 (-)
Gene ID: HRGMv2_4564_1_455
Type: pfam
Location: 464166 - 464759 (+)
Gene ID: HRGMv2_4564_1_456
Type: TC
Location: 464910 - 466307 (+)
Gene ID: HRGMv2_4564_1_457
Type: pfam
Location: 466327 - 467529 (+)
Gene ID: HRGMv2_4564_1_458
Type: CAZyme
Location: 467545 - 468675 (+)
Gene ID: HRGMv2_4564_1_459
Type: TC
Location: 468672 - 469301 (+)
Gene ID: HRGMv2_4564_1_460
Type:
Location: 469311 - 470264 (-)
Gene ID: HRGMv2_4564_1_461
Type:
Location: 470231 - 471238 (-)
Gene ID: HRGMv2_4564_1_462
Type: TC
Location: 471248 - 472675 (-)
Gene ID: HRGMv2_4564_1_463
Type: pfam
Location: 472785 - 473264 (-)
Gene ID: HRGMv2_4564_1_464
Type: TC
Location: 473300 - 475630 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List