Cluster: HRGMv2_4564_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4564
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_7 | HRGMv2_4564_7_26 | 30123 | 31028 | - | 8.A.21.2.2 |
| pfam | HRGMv2_4564_7 | HRGMv2_4564_7_27 | 31095 | 31541 | - | NfeD |
| CAZyme | HRGMv2_4564_7 | HRGMv2_4564_7_28 | 31696 | 33546 | - | GH13_39 |
| CAZyme | HRGMv2_4564_7 | HRGMv2_4564_7_29 | 33816 | 36221 | - | GT35 |
Gene ID: HRGMv2_4564_7_26
Type: TC
Location: 30123 - 31028 (-)
Type: TC
Location: 30123 - 31028 (-)
Gene ID: HRGMv2_4564_7_27
Type: pfam
Location: 31095 - 31541 (-)
Type: pfam
Location: 31095 - 31541 (-)
Gene ID: HRGMv2_4564_7_28
Type: CAZyme
Location: 31696 - 33546 (-)
Type: CAZyme
Location: 31696 - 33546 (-)
Gene ID: HRGMv2_4564_7_29
Type: CAZyme
Location: 33816 - 36221 (-)
Type: CAZyme
Location: 33816 - 36221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.