Cluster: HRGMv2_4564_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4564
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4564_5 | HRGMv2_4564_5_22 | 23463 | 25373 | + | 3.A.1.120.3 |
| CAZyme | HRGMv2_4564_5 | HRGMv2_4564_5_23 | 25557 | 26264 | + | GT111 |
| CAZyme | HRGMv2_4564_5 | HRGMv2_4564_5_24 | 26271 | 27188 | + | GT2 |
| pfam | HRGMv2_4564_5 | HRGMv2_4564_5_25 | 27185 | 29029 | + | Hydrolase |
| CAZyme | HRGMv2_4564_5 | HRGMv2_4564_5_26 | 29035 | 30090 | + | GT2 |
Gene ID: HRGMv2_4564_5_22
Type: TC
Location: 23463 - 25373 (+)
Type: TC
Location: 23463 - 25373 (+)
Gene ID: HRGMv2_4564_5_23
Type: CAZyme
Location: 25557 - 26264 (+)
Type: CAZyme
Location: 25557 - 26264 (+)
Gene ID: HRGMv2_4564_5_24
Type: CAZyme
Location: 26271 - 27188 (+)
Type: CAZyme
Location: 26271 - 27188 (+)
Gene ID: HRGMv2_4564_5_25
Type: pfam
Location: 27185 - 29029 (+)
Type: pfam
Location: 27185 - 29029 (+)
Gene ID: HRGMv2_4564_5_26
Type: CAZyme
Location: 29035 - 30090 (+)
Type: CAZyme
Location: 29035 - 30090 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.